Dehalobacter sp. CP: AAH944_04715
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Entry
AAH944_04715 CDS
T11158
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
deha Dehalobacter sp. CP
Pathway
deha03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
deha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AAH944_04715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deha03400
]
AAH944_04715
DNA repair and recombination proteins [BR:
deha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AAH944_04715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
DUF6363
DUF7837
CDC24_OB3
Amastin
Motif
Other DBs
NCBI-ProteinID:
XOF54560
LinkDB
All DBs
Position
complement(945325..946131)
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AA seq
268 aa
AA seq
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MHTMWKGSISFGLVNIPIKMFAATEEKDIHFRYIHKECSTPLKYQKHCPTCNKEVKEEEI
VRGYEYETGHFIVINETDLIALKSEVEEKSIEILDFINLVEIDPIYYDKSYYLAPQDTGG
KAYHLLRQSMNDTGKIALAKMTIRNKQTLAALRVYNKVLVLETIFYPDEIRPVSEVPGIS
EQQGVNEKELNIATQLIANLTAPFEPEKYKDNYREALKELINKKIEGREIEIAPEAPHRN
VIDLMEALQASLKETKKPSRSKTETTAS
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgcatacaatgtggaaaggttccataagctttggtttggttaatattcccataaaaatg
tttgctgctacggaagaaaaggatatccatttcagatacatccataaggagtgcagtact
cctcttaagtatcaaaagcattgtccgacatgtaacaaagaagtaaaagaagaagaaatc
gtccgcgggtacgaatatgaaaccggtcattttattgttatcaatgagacagatcttatc
gccttaaaatctgaagtggaagaaaagtcgattgaaatccttgattttattaatcttgtg
gaaattgatccgatttattacgacaaatcttattacctggctccgcaggataccggcggc
aaagcctatcatctcctgcggcagtccatgaatgataccggcaaaattgccctggctaaa
atgaccatccgcaataaacagacgctggctgctttaagggtttacaacaaggtcctggtc
ctggaaaccattttctatccggatgaaataagacccgtcagcgaggtaccggggatcagc
gagcagcagggtgtcaacgaaaaagagcttaatatcgcgacccagctgattgccaactta
actgcaccattcgagccggaaaaatataaggataattaccgggaagcactgaaagagctg
atcaataaaaagattgaaggcagggaaatagaaattgcacctgaagcgccccaccgtaat
gtcattgacttgatggaagcccttcaggccagtttaaaagagaccaaaaagccctccaga
agcaaaacagagacgacagcaagctag
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