Dehalobacter sp. CP: AAH944_04780
Help
Entry
AAH944_04780 CDS
T11158
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
deha Dehalobacter sp. CP
Brite
KEGG Orthology (KO) [BR:
deha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
deha03032
]
AAH944_04780 (topA)
03400 DNA repair and recombination proteins [BR:
deha03400
]
AAH944_04780 (topA)
Enzymes [BR:
deha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AAH944_04780 (topA)
DNA replication proteins [BR:
deha03032
]
Prokaryotic type
DNA Topoisomerases
AAH944_04780 (topA)
DNA repair and recombination proteins [BR:
deha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AAH944_04780 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Zn_ribbon_GRF
HVO_2753_ZBP
Toprim_4
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
XOF54573
LinkDB
All DBs
Position
957083..959176
Genome browser
AA seq
697 aa
AA seq
DB search
MSKTLVIVESPAKAKSISKFLSKNYTVKASMGHLRDLPKSQIGVDVDHNFEPKYIAIRGR
GDLVKELKAAAKTADRVLLASDPDREGEAIAWHLTHLLGLNPEELSRIEFHEITKPTIQN
AVKKPRKLDMHLVDAQQARRVLDRLVGYKLSPLLWRKVKKGLSAGRVQSVAVRMICDREE
EIRNFEPEEYWTLDAEFLCRGGSFAAKLLHKQGKKITISSREQMDEVLRELRAAAFTVGE
VKTKEKRKQPAPPFTTSSLQQEAYRKLNYTPKKTMMLAQQLYEGLDLGKAGTVGLISYMR
TDSVRIADTAQEEAKGFIIETYGETYYPEEPRKFASKGRTQEAHEAIRPTSALRTPESVK
GFLGREQFKLYRLIWDRFVASQMSAAVYDTITVDVLAGDYLLRANASAVKFPGYLTVYEE
STDEPEKLDNEENCLKGDLSIGQKLQLRQLQEKQHFTEPPARYTEATLVRKMEEEGIGRP
STYAPTIETIQTRGYVAKEDKKLVPTELGEIVINLLKEHFPDIVDQEFTANMEEKLDDIE
DGKSDWKKIVGEFYGPFADTLDKAEQKIGKIKVEDEVSDEVCELCGRNMVIKMGRFGKFL
ACPGFPDCRNARPLLEEIGVNCPKCGEKLVVRRSKKGRKFYGCSKYPDCDFISWEKPAPH
PCPECGGVMTEKSTRKNKKYVCINHDCRFTEEIKETE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaactttggttatcgttgaatccccggccaaggcaaaatccatcagcaaattt
ttgtctaagaattatacggtcaaagcttccatgggacatctgcgagatttgccaaagagc
cagatcggggttgatgtcgatcataattttgagccgaaatacattgcaatcagaggacgc
ggcgatttggtcaaagagcttaaagctgcagcgaagactgccgaccgtgtcttgctggcg
tccgaccccgacagggaaggtgaagcgattgcctggcacttgacgcacttgctcggtctg
aatcccgaagagctgagcaggatcgaatttcatgaaataacgaaaccaacgattcaaaat
gccgttaaaaaacctcgcaaactggatatgcatctcgtagatgcccagcaggcgcgcagg
gttttggacagactggtgggctacaaattaagcccgcttctgtggcggaaagttaaaaaa
ggtttaagtgccggacgtgttcagtctgttgcggtcagaatgatctgtgacagagaagaa
gaaatccgcaactttgaaccggaagagtactggactctggatgcggaattcttgtgccgg
ggcggcagttttgccgccaaactgcttcataagcagggcaaaaagatcacgatttcgagc
cgcgagcagatggatgaagtattgcgggaacttcgggcggccgcattcacagtcggagag
gtaaaaacgaaggaaaagcgaaaacagccggcgcctccttttacgaccagcagtctccag
caggaagcctaccgcaaattaaactatacacctaaaaagacgatgatgctggcccagcag
ctctatgaaggacttgatctcgggaaggccggtacggtcggattgatttcgtatatgcgt
acggattctgtccggatcgccgacactgcacaggaagaggccaaaggttttatcatcgag
acttacggcgaaacctattatcccgaagagccgaggaaatttgccagcaaaggccggacc
caggaagcgcacgaggcaatcagaccaacatccgctctcaggacgcctgaatccgtcaaa
ggctttctcggacgggagcagttcaagctttaccggctgatatgggaccgttttgtcgcc
agtcagatgagtgcggcggtttatgatacgattaccgtagacgttctggctggtgattac
cttttaagagccaatgcttcagcagtgaagtttccgggatatctcaccgtctatgaagaa
agcactgatgaaccggaaaaactggataatgaggaaaactgcctgaaaggagatctcagc
atcgggcagaagctgcagttaaggcagcttcaggagaagcagcatttcaccgagcccccg
gcgcgttatactgaggcaaccttggtccgaaaaatggaggaagaggggatcgggcgtccg
agtacgtatgcgccgacgattgaaacgattcaaacgaggggctatgtagcaaaggaagac
aagaaacttgttccaaccgagcttggtgaaattgtgatcaacttgctgaaagagcatttt
ccggatattgtcgaccaggagtttacagccaacatggaggagaagcttgacgatatcgaa
gacggaaaatcggattggaagaaaattgtcggagaattttacggcccgtttgccgataca
cttgataaagctgaacagaagatcggcaaaatcaaagttgaggatgaagtttcagatgaa
gtctgtgaactttgcggcaggaatatggtcatcaagatgggacggttcggaaagtttttg
gcttgccccggttttcctgactgccggaatgcgcggcctttactcgaggaaatcggcgtg
aactgcccgaaatgcggagaaaaacttgtcgtcaggagatcgaaaaaaggacgtaagttt
tacggctgcagcaaatacccggactgtgattttatttcctgggagaaaccggcacctcac
ccttgtccggagtgcggcggggtaatgaccgagaaaagtaccagaaaaaacaaaaaatat
gtctgcatcaatcatgactgcaggtttaccgaagaaatcaaggaaacagaataa
DBGET
integrated database retrieval system
