Dehalobacter sp. CP: AAH944_04910
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Entry
AAH944_04910 CDS
T11158
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
deha Dehalobacter sp. CP
Brite
KEGG Orthology (KO) [BR:
deha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
deha03016
]
AAH944_04910 (truB)
Enzymes [BR:
deha01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AAH944_04910 (truB)
Transfer RNA biogenesis [BR:
deha03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AAH944_04910 (truB)
Prokaryotic type
AAH944_04910 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
HerA_C
Rv2175c_C
IDEAL
Motif
Other DBs
NCBI-ProteinID:
XOF54599
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All DBs
Position
988577..989461
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AA seq
294 aa
AA seq
DB search
MDGIINVLKPVGMTSTDVVRWLLRKTKAGKAGHIGTLDPGAAGVLPICLGKATRLAEYHS
DQGKSYRAEITLGITTDTQDAFGQELSRIVPIVSRAQFANKLENFLGVIEQEPPMYSAVR
KNGRHLYEYARQGIDVAREKRQVEIKRLDLVEWHEETFPRVLFDVECSKGTYIRTLCHDI
GAALGCGAHMSFLLRLSAGKFTLDSTYTLEEIDQALADGDEHMLLAPEWGLTLPKASIPA
YRLAAFRNGLSTGGDLVDAEVYGEQLPVQVFCEGRFIGIGNWENGCLCPNKVMG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
ttggacgggatcattaatgttttaaaacctgttggaatgacctccacagacgttgttagg
tggctgcttcgaaaaacaaaagccggcaaggcaggccatattgggacgctggatcccgga
gctgccggggtgcttccgatttgccttggcaaggcaacgcggctggcagaataccacagt
gaccaggggaaaagttatagagctgagattacactcggaatcacgacagatacgcaggat
gctttcggacaggaactatcgaggattgttcctatagtatcacgagcgcaatttgcaaat
aaactggagaattttcttggtgtcattgaacaggaaccgcccatgtattccgctgtcaga
aagaatggcaggcatctgtacgaatatgcccgccaggggatcgatgttgcaagagaaaaa
agacaggttgagatcaagcggctggatctggtggaatggcatgaagagacgtttccaaga
gttctatttgatgtggaatgctccaaaggaacgtatatacgcactttatgtcacgatatt
ggcgctgccctgggctgcggtgcacatatgtcctttttgctcagattaagcgcaggcaag
tttacgctggattccacctacacactggaagagattgaccaggcgcttgccgacggcgat
gaacacatgctcctggctccggaatggggactcacactgccaaaggcaagtataccggcc
tatcggcttgccgctttccgaaacgggctttctaccggaggggatcttgttgatgctgaa
gtgtacggggaacagcttcctgttcaggtattttgtgagggacgttttattggcataggg
aattgggaaaacggatgtttatgccccaataaggtgatgggttag
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