Dehalobacter sp. CP: AAH944_04925
Help
Entry
AAH944_04925 CDS
T11158
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
deha Dehalobacter sp. CP
Pathway
deha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
deha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAH944_04925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
deha03019
]
AAH944_04925
03016 Transfer RNA biogenesis [BR:
deha03016
]
AAH944_04925
Enzymes [BR:
deha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AAH944_04925
Messenger RNA biogenesis [BR:
deha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AAH944_04925
Transfer RNA biogenesis [BR:
deha03016
]
Prokaryotic type
tRNA degradation factors
AAH944_04925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
Ribul_P_3_epim
KH_2
Motif
Other DBs
NCBI-ProteinID:
XOF54602
LinkDB
All DBs
Position
991021..993159
Genome browser
AA seq
712 aa
AA seq
DB search
MTQEVLERSLQVGGRNLSFETGIIGRQAGGAIYARYGDTVISAFATTSSKPREGIDFFPL
TVDLEERFYAVGKIPGGFIKREGRPSEKSILSSRLIDRPVRPLFPDGYRNDVQISAMVMS
VDQDCAPDVTAINAVSAALTISDIPFLGPIAAVVVGLVDGEFVVNPTVAQTEISKMQLTV
AGTKDAIMMVEAGAKEVPEDQMLEAIMFAHEEIKKIAEFIERYREAALEVGLAKAKREVT
PVEIPAEISDKVLAWGYDKLDQAIRIEEKLARQEAVDKVKADALEVFAEEFPEDLKLVTK
ILDDLTHKIVRKLITHEHIRPDGRALDEIRPITIEVGRLPRTHGTGLFTRGQTQVLTVAT
LGAAGDEQIIDGLGLEDSKRYMHHYNFPAFSVGEVRPNRGPGRREIGHGALAERALLPMI
PPESEFPYTLRLVSEVLESNGSSSMASVCGSTLALMDAGVPIKAPVAGIAMGLIKEEDHF
AILTDIQGLEDHDGDMDFKVAGTAEGITALQMDIKIKGVNREILAQALAQAKAGRMFILD
KMLQVLPQSRPNLSPFAPRIITFAIHPDKIRDVIGPGGKIIKKIVEETKVKIDIEDDGQV
FIAAVDGEAGDKAAEIIRSLTQDIEVGKIYKGKVVRIMDFGAFVEVIPGVLGLPGKDGLV
HISQLDVNRVNKVEDVVKLGDEIIVKATGIDKQGRLNLSRKEAMGQSQGAKE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgactcaagaagtcttggaacgctcgctacaggttggaggcagaaacctgtcgtttgaa
accggtatcataggtcgtcaagccggtggggcaatttatgccagatatggagacacagtc
atatctgcatttgcaacgaccagttctaaaccacgggaagggatcgacttttttcctttg
actgttgatttggaagaacgtttttatgccgtaggaaagattcccggtggattcattaaa
agagaaggcagacctagtgagaagtccatattgtcgtcaagactgatagacagaccggtc
cgtccgcttttcccggacggttaccgcaacgatgtacagatcagtgcgatggtcatgtcc
gtcgatcaggactgtgcaccagacgtaacggctatcaacgcagtttcggctgcgctcacg
atttccgatattccttttctggggcctattgccgccgtggttgtcgggcttgtcgatggc
gagtttgtcgttaacccgacggtagcccagacggaaatcagcaaaatgcagctgactgtt
gctggaaccaaagatgcgattatgatggtcgaggctggtgccaaggaagttcccgaggat
cagatgcttgaagcgatcatgtttgcgcacgaagaaattaaaaagatagcagaatttatt
gagagatacagggaagcagccctggaagtgggacttgccaaagccaaaagagaagtcact
ccggtcgagatccctgcggaaatatccgacaaggtcctggcctggggttatgataagctc
gatcaggctatccgtattgaagaaaaactggcccgccaggaagctgtcgacaaggtcaaa
gcagatgcgctcgaagtttttgccgaggaatttcctgaggatttaaaattagttacgaaa
atattggatgacctgacccataaaattgtccgtaagctgattacccacgaacatatcaga
cctgacggccgtgctttggatgagatcaggccgattacgattgaagtcggacgtctgcct
agaacacacggtaccggtctgtttacgcgcggacagacacaggtactcacggttgcgaca
ttaggagctgccggtgatgagcagatcatcgacggtttgggattggaagattccaaacgt
tatatgcatcattataatttcccggccttcagtgtcggcgaagtccgtccgaacagggga
ccgggcagacgtgagattggtcacggcgctttagcagaacgtgccttgctgccgatgatt
cctccggaaagtgaattcccgtatacgctgcgtctggtttccgaagtattggagtccaac
gggtcgagctccatggcttccgtctgcggcagcacactcgcgttgatggatgcaggggtt
ccgattaaggctccggtagctgggattgcgatgggactgatcaaagaagaagaccatttt
gcgattcttaccgatattcagggtttggaagaccacgacggtgatatggactttaaagta
gccggtactgccgagggcattacagcactgcagatggatatcaagatcaaaggcgtcaac
cgtgaaattctcgctcaggctctggctcaggccaaggccggcaggatgttcatcctagat
aaaatgctgcaggtcctgccacagtccagaccgaatctctcgccgtttgcaccgcggatt
attacctttgccattcatcctgataaaatcagagatgtcatcggaccaggcggcaagatc
attaagaagatcgtggaagaaaccaaggtcaaaattgatatcgaagatgacggacaggta
tttattgctgcggttgatggtgaagccggagacaaggcagctgagattattcgctcttta
acgcaggacattgaagtcgggaagatctacaaaggcaaagttgtccggatcatggatttt
ggtgcctttgtcgaagtcattccaggtgtgcttggacttccgggaaaagacggtcttgtg
catatctcccagctcgatgtgaaccgcgtgaacaaagtagaagatgtcgtcaaactcggc
gacgagatcatcgtcaaggctaccggtattgacaagcagggcagactgaacttgtcccgt
aaagaagcaatgggacagagccagggagcaaaagaataa
DBGET
integrated database retrieval system
