Dehalobacter sp. CP: AAH944_07120
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Entry
AAH944_07120 CDS
T11158
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
deha Dehalobacter sp. CP
Pathway
deha02024
Quorum sensing
deha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
deha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAH944_07120 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AAH944_07120 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
deha03019
]
AAH944_07120 (hfq)
03036 Chromosome and associated proteins [BR:
deha03036
]
AAH944_07120 (hfq)
Messenger RNA biogenesis [BR:
deha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AAH944_07120 (hfq)
Chromosome and associated proteins [BR:
deha03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
AAH944_07120 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
XOF54995
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All DBs
Position
1405368..1405613
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AA seq
81 aa
AA seq
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MNKSPINLQDVFLNQIRKDNIPVTIYLVNGFQLKGLVKGFDNFTVVLDYEGKQQMVYKHA
ISTIMPMRQVNLNALVGEMTE
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcaccgattaacttgcaggatgttttcttgaaccaaatccgcaaagataac
atacctgttacgatctatttggtcaatggattccagcttaaaggattagtcaaaggtttt
gataattttacggttgttctggactacgaaggcaaacaacaaatggtatataaacatgcc
atttctaccataatgccaatgagacaagtcaatttaaatgccttagtcggggaaatgact
gagtaa
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