Dehalobacter sp. CP: AAH944_07295
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Entry
AAH944_07295 CDS
T11158
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
deha Dehalobacter sp. CP
Pathway
deha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
deha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAH944_07295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
deha03019
]
AAH944_07295
03009 Ribosome biogenesis [BR:
deha03009
]
AAH944_07295
Enzymes [BR:
deha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AAH944_07295
Messenger RNA biogenesis [BR:
deha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AAH944_07295
Ribosome biogenesis [BR:
deha03009
]
Prokaryotic type
rRNA helicases
AAH944_07295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrD-helicase
AAA_19
NAT10_TcmA_helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XOF55029
LinkDB
All DBs
Position
complement(1439978..1441423)
Genome browser
AA seq
481 aa
AA seq
DB search
MHEASFQRYPLSPEILKALHLLNYNKPTNVQQQVVPLFLAQKDVIVKSQTGSGKTAAFAI
PLCQLVDWEENKPQALIITPTRELAIQVKEDLFHIGRFKRLKIAAVYGKSPFYYQEKELK
QKTHIVVGTPGRLIDHLQKGTLDTSCVKYLVIDEADELMNMGFLEQTETILGSLSADRVT
ALLSATMPSDVRTLCDHYLREPVYVETQEETSAAERISQERYLLTRQDKIKLLKDLSVTE
NPDSCLIFCNTKHQVDEVYAELKLLDYPCAKIHGGMEQGHRLSVMDDFKRGYFRYLIATD
VAARGIDIEDISLVINFDLPQEKESYVHRIGRTGRLNKNGKAISFVTEEDDSYLQDIQKY
IGQEIPLKQRPSQDTVRNAEVGFQEKITVLPDNKAMKGTRINLEIMKLQINAGKKSKIRP
ADIVGALTNIAGMTAADIGIINILDELSYVEILNFKGPLVLEALQTTPLKGKLRKVRKVN
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaggcttcttttcaacgctatccgttaagtccggaaatattaaaagcccttcac
ctgctgaattataacaagcctaccaacgtccagcagcaggtcgtcccattgtttctggcg
caaaaagatgtgattgttaaatctcagaccggcagcggcaagacggctgcttttgctatt
ccgctttgccagctggtggattgggaagaaaataaacctcaggccctgatcatcacgcca
acgagagaactggccatccaggtcaaagaggatctgtttcatatcggccgttttaaaaga
ctaaaaattgctgcagtatacggtaaatctcctttctattatcaggagaaagagctgaag
caaaaaacgcatattgtggtgggaacgcctggccggctgatcgatcatcttcagaaagga
acgctggatacttcttgtgtcaaatacctggttattgacgaagcggatgaactgatgaat
atgggctttctggaacagacggaaaccatccttggcagcttgtctgccgaccgcgttaca
gccctgctgtcggccacgatgccttctgatgtcagaacactgtgtgatcactatttgcgc
gagccagtctatgtagaaacgcaagaagaaacatccgccgcggaaagaatttcccaggaa
agatacctccttacccgacaggataaaataaagcttcttaaagatctttcagtcactgag
aaccccgatagctgcctgatcttctgcaataccaaacatcaggtggatgaggtctatgcg
gaattgaaactgcttgattatccctgcgccaaaattcatggcggaatggaacaagggcac
cgtctgagtgtcatggatgattttaaacggggttattttcggtacctgattgcaacagat
gtggcagcccgggggattgacatcgaagatatttcacttgtcatcaactttgatctgccg
caggaaaaggaaagctatgtacaccggattggcagaacagggcgtttgaataaaaacggc
aaagcaatctcctttgtgaccgaagaagatgacagttacctgcaggatatacagaaatat
attggacaggagatcccgctgaaacaaagaccgtctcaggatactgtccgcaatgcagaa
gtcggctttcaggaaaaaataaccgttttgccggataataaagccatgaaaggcacccgg
atcaatttggaaatcatgaagctccagatcaatgccggaaagaaatccaagatccggccg
gcagatattgtgggcgcactgacgaacattgcgggtatgactgcagctgacatcgggatt
atcaatattttggatgaattgagttatgtggaaatcctaaactttaaagggccacttgtc
cttgaagccttgcaaacaacgccgctcaaaggtaaactgcggaaagtaagaaaagtgaat
cgctga
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