Dehalobacter sp. CP: AAH944_10180
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Entry
AAH944_10180 CDS
T11158
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
deha Dehalobacter sp. CP
Brite
KEGG Orthology (KO) [BR:
deha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deha03400
]
AAH944_10180
Enzymes [BR:
deha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AAH944_10180
DNA repair and recombination proteins [BR:
deha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AAH944_10180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Vmethyltransf_C
Synaptobrevin
Motif
Other DBs
NCBI-ProteinID:
XOF52895
LinkDB
All DBs
Position
complement(2066070..2069633)
Genome browser
AA seq
1187 aa
AA seq
DB search
MSLRFIYGRSGSGKSTYCLNEIKERVKNGADHPLVLLVPEQYTLQAERDLINVLKTGGIL
KTEVLSFRRLAFRVFNEAGGITYPHIHPAGKSMLIYRVLTQIKDELKVYTRSADRKGFVS
SLSGLITELKRYNVTPEDLQNVIADMADQPLRDKLAELNAVYSGFEELIRQRYRDSDDDL
TLAAAKLESTNIFDGAEIWVDGFAGFTRQEYKVITRLLLKVNRVNICLCTDCLDEEGLME
TDVFSEVKGVYRKFKKICQEAGLEIEPSVHLAEVPLPRFRCSTELSHLERYYDAYPYRVY
PEATRDISLHASVNIYAEIEAAAADIVRLCRDRGLRYRDIAVVTGNLDGYRSFLETVFAE
YEIPYFLDSKTEITDQPLVRMILAMLDIFNDHWSYEAVFAYLKTGLTGLDRERMDRIENY
VLACGVRGSRWTKNEDWSMRPGLLPEENDRSQDVEKAETELKEINQTRREIVAPLLQFRA
KTKNRKKASEICEALYDFLGGIGVPARLERIMEEFRRQGMLSLANEYGQVWNILMNVLDQ
TVETMGEEPLSLESFTDTLKIGFAEYRIGLIPASLDQVLIGSIERFRSHQIKALFILGVN
DGVFPSTAQTEGILADADRAALNTVGIELANDTRTQAFQAQYLIYRSLTTASAYLRLSWP
IADQEGRSLRPSLVIYRLRKLFPEILENSTLIPALSRFAAGKENAETENIGTENTETKNT
EVVNAGTENTWLESAELEQLTGKSPSFKQMVAAFRRKAEGLEINGWWRDVYRWYNGLEEW
KPRCEALQTAFSARNIAEPVSSAKITALYGASAHASASRLEKYASCQFAFYLQYGLEAKE
RKIYQFSPPDVGTFMHAVLERFSLEAAQQQISWREMERPWCREKVSEIVDEMLRKMQGSG
LTSSQRYTSLALRLKRVITRAVWMIAEHLKRSGFEPLGYELGFGEREKFPPIVIELDSGR
KVSLSGRIDRVDALEAEEGTYLRIVDYKSGSKDFKLADVYYGLQIQLFTYLDALWQNSGL
ETEKPVLPGGILYFRIDDPIVRADGRLTEEEIELDIMKQLKMKGLLLADVKLIKEMDRTI
DGTSLIIPARINKGDLLGKSSAATLEQFEILRKYVRNLLKDLCEEMMGGSVSITPYKKKR
ITSCTYCCYAAVCQFDPARKENSFRLLTAHGDEEIWNHIMKAEQNHD
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttaggtttatttacggacggtccggcagcggcaagtccacctattgcctgaat
gaaataaaggaacgcgtcaaaaacggagcggatcatcctttggtgctgcttgtgccggaa
cagtatacgctgcaggcggagagggacttgattaatgtgctgaagaccggcgggattcta
aagacggaagtattaagtttccgccgcctggcattcagggtatttaacgaggcgggcgga
atcacgtacccgcatatccacccggcaggcaagagcatgttgatctaccgtgtccttacg
cagattaaagacgaactgaaggtctatacgagatcagccgaccgcaaagggtttgtcagt
tcgctttcagggctaatcacagagctgaaacggtataatgttacgccggaagatctgcag
aacgtcattgccgatatggcggaccagccgctcagggacaaactggctgaactgaatgcc
gtctattccgggttcgaggaactgatccggcaaagatatcgggatagtgacgatgatctt
accctggcggcagccaagctggaatccacaaacatttttgacggcgcagaaatctgggtt
gatggttttgccggatttacacgacaggaatacaaagtcatcacaaggctgctgcttaag
gtgaacagggtgaacatttgtctgtgtacggactgtcttgatgaagaaggtctgatggaa
accgatgtattctctgaagtcaaaggcgtgtaccgtaagttcaagaaaatctgccaggag
gcgggcttggagattgagccgtcggttcatttggcggaagttcctctgcccaggtttcgc
tgcagtacggagttgtcccacctcgaacggtattatgatgcctatccgtaccgggtatat
ccagaagcaaccagggatatctccctgcatgcttcggtgaatatctatgcggagattgaa
gctgcagcggcagacatcgtcaggctttgccgggatcgagggctcagatacagagatatc
gccgtagtcaccggaaatctggacggctaccggagtttcctggaaactgtttttgctgag
tatgaaattccatattttttggacagtaagaccgagatcacagatcagccgctggtcaga
atgattctggcgatgctcgatatttttaacgaccactggtcttatgaagcggtatttgcg
tatctgaaaaccggattgaccggtctggacagggagcgtatggaccgcatcgaaaattat
gtactggcctgcggagtccgcggaagccgctggacgaaaaatgaagactggtcgatgcgt
ccaggcttactgccggaagaaaatgaccggtctcaagatgtggaaaaggccgaaacggag
ctgaaggagatcaatcagaccagacgcgagattgtagccccgcttcttcaattccgcgcc
aaaaccaagaacagaaaaaaggcttcggaaatttgcgaagccctgtatgattttcttggc
gggataggcgtcccggccaggttggaaaggatcatggaagaattcaggcggcagggtatg
ctgagtctggccaatgaatacggccaggtctggaatatcctgatgaacgtcctggatcag
accgtggagactatgggcgaggagcctttgagtttggaaagctttacggacaccctgaaa
atcggctttgccgaataccggatcgggttgataccggcttcgctggatcaagttctgatc
ggcagcatcgagaggttccgaagccatcagatcaaagcactttttattttaggggtcaat
gacggggtgttcccttccactgcgcagacggaaggtatcctggccgatgcggaccgtgcc
gcgctgaatacggttgggattgaactggctaatgatacccgcacgcaggcctttcaggcc
cagtatctgatttaccggtctttaacgaccgcatctgcttatcttcgcctgagctggccg
atcgccgaccaggaaggccgaagcttgcggccttcgttggtgatttaccggctgaggaag
ctgttcccggaaattttggaaaacagcacgctgattccagcgctatccaggtttgctgct
ggtaaagaaaatgctgagacggagaatatagggacagagaatacagagacgaagaataca
gaagtggtgaatgccggcacagaaaatacctggctagaaagtgctgaattggaacagctg
accggaaaatctccttctttcaaacaaatggttgcagctttccgccgcaaggcagaaggg
ctggaaatcaacggctggtggcgggatgtctatcgctggtacaatgggctggaagaatgg
aaaccgcgctgtgaggcacttcagacagcattctcagccagaaatattgccgagccggtc
agctcagcaaaaataacggcattgtatggcgcatcggctcatgccagtgcatcgaggctc
gaaaaatatgcgtcctgtcagtttgcattttatcttcaatatggacttgaagccaaagag
agaaagatttatcagttcagtccgccggatgtcgggacgtttatgcatgccgttctcgaa
agattttcgctggaggcggcgcagcagcaaatctcttggcgagagatggaaagaccgtgg
tgccgggagaaagtctcggagattgtggatgaaatgcttcgaaaaatgcaggggtccggc
ctcacgtcctcccaacggtatacttcacttgccttgagactgaaaagggtcatcacgcgt
gcggtctggatgattgcggagcacctcaagcgcagtggctttgagccgttgggttatgag
cttggatttggcgagcgggaaaagttcccgccgattgtgattgaacttgattcaggccgg
aaggtgtctttaagcggaaggattgacagggtcgatgcgttggaagctgaagaagggacc
tacctcagaatcgtggattataaatctgggagcaaggatttcaaactggccgacgtttat
tacggactgcagatccagttattcacgtatctcgatgccctctggcagaacagtgggctg
gagacggaaaaaccagtcctgccgggaggcatcctgtatttccggatcgatgatcctatc
gtcagagctgatggcaggcttacggaggaagagatcgagctggacattatgaaacaactg
aaaatgaagggcctgctgctcgcggatgtcaaattgattaaggaaatggaccggaccatc
gacggcacttcgctaattattccggctaggatcaataagggagaccttctgggcaaatcc
tcggcagctaccctggaacaatttgaaatcctcagaaaatatgtccgaaaccttctgaaa
gacttatgtgaggaaatgatgggcggcagtgtttcgatcacgccgtacaagaaaaagcgg
ataacctcgtgtacctactgctgctacgcagcagtctgccaatttgatccggccagaaag
gaaaatagcttccggttgctgaccgcccacggagatgaggaaatctggaaccatatcatg
aaggcggaacaaaatcatgactga
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