Dehalobacter sp. CP: AAH944_10210
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Entry
AAH944_10210 CDS
T11158
Symbol
abc-f
Name
(GenBank) ribosomal protection-like ABC-F family protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
deha Dehalobacter sp. CP
Pathway
deha02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
deha00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AAH944_10210 (abc-f)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
deha02000
]
AAH944_10210 (abc-f)
01504 Antimicrobial resistance genes [BR:
deha01504
]
AAH944_10210 (abc-f)
Transporters [BR:
deha02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
AAH944_10210 (abc-f)
Antimicrobial resistance genes [BR:
deha01504
]
Gene variants
Macrolide resistance genes
Transporters
AAH944_10210 (abc-f)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_23
TsaE
Dynamin_N
NACHT
MMR_HSR1
ABC_tran_Xtn
YobI-ATPase
AAA_15
Motif
Other DBs
NCBI-ProteinID:
XOF55122
LinkDB
All DBs
Position
complement(2074731..2076209)
Genome browser
AA seq
492 aa
AA seq
DB search
MALINIDHLTFCYDGSYDNIFENVSFQIDTDWKLGFTGRNGRGKTTFLQLLCGKYEYRGT
IESPVSFDYFPFQVTDPSQNVIEVVASICPAFEHWELQKELSLLEVAEDVLELPFAALSQ
GEQTKVLLAALFIKPHNFLLIDEPTNHLDIEGRRVVGKYLNRKTGFILVSHDRFFLDRCI
DHILTINKTNIELQKGNFSTWWVNKERTDSFETAENDRLQKEIKQLSAAARRTAGWSDKI
EKTKKGTLNSGIKPDKGYIGHQAAKMMKRSKVIEARQQKNIQTKEKLLKNIELADSLSMR
PLSHPKNTLVELRDLAIYYADRKVCENVHFTVERGERVALSGRNGSGKSSVLKLLIGEDL
ASSGKVNIGSNLRISYISQDTAYLQGSLRSFAEQYQIEESRFLTILHKLDFSGVQFEKDM
RMFSAGQKKKVLLAKSLCEQAHLYIWDEPLNYIDVLSRMQIEDLIVRCRPTLLFVEHDSA
FVQSVATKYIRL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgattaacatcgaccatttaacgttttgctatgacggcagttatgacaatatt
tttgaaaatgtatcttttcagatcgatacggactggaaacttgggttcactggccggaac
gggcgcggtaaaacaacctttttgcagctgctgtgcgggaaatacgagtaccgtggaaca
attgaatcccccgtgtcttttgattattttccttttcaggttaccgatcccagtcaaaat
gtcattgaggtagtggcaagtatctgccctgcttttgaacattgggaacttcagaaagaa
ttgtcattgctcgaagttgcagaggatgtcctggagctgccttttgcagccttaagccaa
ggggagcagaccaaggttttgcttgcggcactgtttattaaaccccacaactttcttttg
atcgatgaaccgaccaatcatctggacatagagggcaggcgcgttgtcgggaaatatctg
aacaggaaaaccggctttatcctggtttcgcatgacaggttttttctggaccgttgtatc
gaccatatcctgaccatcaataaaaccaatattgaacttcaaaaaggcaatttttcaacg
tggtgggtcaataaagagagaacggattcgtttgaaacagcagagaatgacaggctgcag
aaagagatcaaacaattatcggcagcagccaggcggacggccggctggtcggataaaatt
gagaagaccaagaagggaacgctgaactccggcatcaagccggataaaggctatatcggc
caccaggcggcaaaaatgatgaaacgatccaaagtgatcgaagctcggcagcaaaagaac
atccagacgaaagaaaaacttttaaaaaatatcgagctggccgacagcctgagtatgaga
cctctttcacacccgaaaaatacacttgtggaattacgtgacctggcaatctattatgcg
gacaggaaggtctgcgagaatgttcattttactgtagagagaggagagcgggtggcctta
agtggcaggaatggcagcggcaaatccagtgttttaaagctgctgattggagaagatctt
gcctccagcggcaaggtcaatattggaagtaatctaagaatctcctatatttcgcaggat
accgcttacttgcagggcagtctgcgcagttttgcggagcagtaccagattgaggaaagc
cgttttctgaccattctgcacaagctcgatttctcaggcgttcagttcgaaaaagatatg
cgtatgttcagcgcagggcagaagaaaaaggtgctcctggccaaaagtctctgcgagcag
gcccatctgtatatctgggatgagccgctgaactatattgacgttctgtcccggatgcag
attgaggacctcattgtaagatgccggccaaccctgctgtttgtggagcatgacagtgcg
tttgtgcaatcagtggcaacaaaatatatcaggctttga
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