Dehalobacter sp. CP: AAH944_13210
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Entry
AAH944_13210 CDS
T11158
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
deha Dehalobacter sp. CP
Pathway
deha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
deha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAH944_13210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
deha03019
]
AAH944_13210
03009 Ribosome biogenesis [BR:
deha03009
]
AAH944_13210
Enzymes [BR:
deha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AAH944_13210
Messenger RNA biogenesis [BR:
deha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AAH944_13210
Ribosome biogenesis [BR:
deha03009
]
Prokaryotic type
rRNA helicases
AAH944_13210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DeaD_dimer
AAA_19
AAA_22
CMS1
NAT10_TcmA_helicase
DUF7528
CobA_CobO_BtuR
Motif
Other DBs
NCBI-ProteinID:
XOF53460
LinkDB
All DBs
Position
2669366..2670781
Genome browser
AA seq
471 aa
AA seq
DB search
MSNFFEIGLSNVLTKAISEMGFEETTPIQERTIPLALEGKDIIGQAQTGTGKTAAFGIPM
IERMSPDRESIKALVVTPTRELAIQVAEELNRIGQFKGVRSLPIYGGQDIDRQIRSLRNR
PQIIVGTPGRLMDHMRRKTIRLQQVETVVLDEADEMLSMGFVEDIENILKEVPEQRQTLL
FSATMPKSILDLAQRFMQTPEFISMRTKEIIVPQIEQCYVEVQEKQKFDVLCRLLDIQSP
DLAIVFGRTKRRVDELFEALSKRGYSAEGIHGDLTQARRDMVMRHFKEGLTEILVATDVA
ARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKGGQAITFVTPREIGHLRLIEQVAK
RRITRKPLPTFNDVLVGQQRMTMDKILKAAEDEDILRYKEMAEELLEDNDSITMLSAALK
LLTKEPNTAPIVLTEEAPLRSRQPRRFDQQQGFHRNRDNSKYPSRFPKRKF
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatttttttgaaataggcctcagtaatgtactgaccaaagctatttctgaaatg
ggctttgaagaaaccacaccgattcaggagagaacgatcccgcttgccctggaaggcaag
gatattatcgggcaggcgcagaccggaacaggcaagacagccgctttcgggattccgatg
attgagcgtatgagtcctgacagagaaagtatcaaagcccttgtggtcacaccaacccgg
gaactggctatccaggtagctgaagaactgaaccgtattggtcagtttaaaggtgtccgg
tccctgccaatttacggcggacaggatattgaccggcaaatccggtctctgcggaaccgg
ccgcagattattgtggggactcccggacggctgatggaccatatgagaagaaaaaccatc
cgtctgcaacaggttgaaacggtcgtgcttgatgaagcagacgaaatgctcagtatgggt
ttcgtggaagatattgaaaacattctaaaggaagttcccgaacaaaggcagacgctgctt
ttttcggcaacgatgccaaaatcgattctggatttggcccagcgctttatgcagactccg
gaatttatcagcatgagaaccaaagagatcatagttcctcaaatcgaacagtgttacgtg
gaagtccaggaaaaacaaaagttcgatgtgctctgccgcctgctggatattcagtctccc
gatctggccattgtctttggccggacaaagcggcgggtcgatgagctgtttgaggcttta
agcaaaagaggttattccgccgagggaatccacggcgacctgacccaggccaggcgcgat
atggttatgcgtcattttaaagaaggtttaacggagattctggttgctacggacgttgcg
gccagaggtctcgatattagcggcgtgacgcacgtctacaattttgacgttccccaggat
ccagagagctatgtccacagaatcggtcgtaccggccgagctggcaaaggcggacaagcg
attacgtttgtcaccccgagagaaattggccatttaagactgatcgagcaagttgccaaa
aggagaattacgcgcaagcctctgccaacctttaacgacgtacttgtcggccagcagcgc
atgaccatggataaaattcttaaagctgctgaggacgaagatattctacgctacaaggaa
atggcggaagaattgttagaggacaacgattctatcacgatgttatccgctgcactgaaa
ctactgacgaaggagccaaatacggctccgatcgtgctgaccgaggaagcgcctttgcgt
agtaggcagccccgcaggtttgaccagcagcaaggattccaccgaaaccgcgataacagc
aaatatccttcaagatttccgaaacggaaattctaa
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