Devosia sp. I507: C4375_03220
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Entry
C4375_03220 CDS
T05346
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dei
Devosia sp. I507
Pathway
dei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C4375_03220 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dei03019
]
C4375_03220 (groL)
03110 Chaperones and folding catalysts [BR:
dei03110
]
C4375_03220 (groL)
03029 Mitochondrial biogenesis [BR:
dei03029
]
C4375_03220 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dei04147
]
C4375_03220 (groL)
Enzymes [BR:
dei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
C4375_03220 (groL)
Messenger RNA biogenesis [BR:
dei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
C4375_03220 (groL)
Chaperones and folding catalysts [BR:
dei03110
]
Heat shock proteins
HSP60 / Chaperonin
C4375_03220 (groL)
Mitochondrial biogenesis [BR:
dei03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
C4375_03220 (groL)
Exosome [BR:
dei04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
C4375_03220 (groL)
Exosomal proteins of other body fluids (saliva and urine)
C4375_03220 (groL)
Exosomal proteins of breast cancer cells
C4375_03220 (groL)
Exosomal proteins of colorectal cancer cells
C4375_03220 (groL)
Exosomal proteins of bladder cancer cells
C4375_03220 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AVF02841
LinkDB
All DBs
Position
699406..701046
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEVKFSTDAREKMLRGVNVLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELEDKFENLGAQLLRSVASKTNDVAGDGTTTATVLGQAIVVEGVKAVAAGFNPMDLKRGI
DLAVSDVIESLKGSAKGITSSSEVAQVGTISANGETSIGDMIAEAMQKVGNEGVITVEEA
KTAETELDVVEGMQFDRGYLSPYFVTNTEKMTATLEDPYILLHEKKLSNLQAILPILEAV
VQSQRPLLIIAEDVDGEALPTLVVNRLRAGLKVAAVKAPGFGDRRKAMLEDIAVLTGGQV
ISEDLGIKLENVTLDMLGTAKRVEITKENTTIVDGAGTADDIQARVGQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDALNATRAAVEEGIVPGGGVALL
RASANIKSKGANADQEAGIAIVRRALQAPVRTIANNAGAEGSVVVDKILENSEISFGYNA
ATGEYGDLVVLGVIDPVKVVRTALEDAASVASLLITTEAIIVEAPKPEAPAMPGGGGMGG
MGGMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaaggaagtcaaattctcgaccgacgcccgcgaaaagatgctgcgcggcgtc
aatgtcctcgccaatgcggtgaaggtcacgctcggccccaagggtcgtaacgtcgttatc
gaaaagtcgttcggcgctccgcgcatcaccaaggacggcgtaaccgtcgccaaggaaatc
gagctggaagacaagttcgaaaacctcggtgcgcagctgctgcgttcggtcgcttccaag
accaatgatgttgccggtgacggcaccaccaccgcgaccgttctgggtcaggccatcgtg
gtcgaaggcgtcaaggccgttgccgccggcttcaacccgatggacctcaagcgcggtatc
gatctggcggtctccgatgtgatcgagagcctcaagggctcggccaagggcatcacctcg
tcctccgaagtggctcaggtcggcaccatttccgccaatggcgagacctccatcggtgac
atgatcgccgaagccatgcagaaggtcggcaacgagggtgtcatcaccgtcgaagaagcc
aagaccgccgaaaccgaactcgatgttgttgaaggcatgcagttcgaccgtggttacctg
tcgccctatttcgtgaccaacacggaaaagatgacggcaaccctggaagacccgtacatc
ctgctgcacgaaaagaagctctccaacctgcaggccatcctgccgatcctggaagctgtc
gttcagtcccagcgcccgctgctgatcatcgctgaagacgttgatggcgaggccctgccg
acccttgtcgtcaaccgtctgcgcgccggcctcaaggtcgctgccgtcaaggctcctggc
tttggtgaccgccgcaaggccatgctggaagacatcgccgttctgaccggtggccaggtg
atctccgaagacctcggcatcaagctcgagaacgtgaccctggacatgctcggcactgcc
aagcgcgtcgagatcaccaaggaaaacaccacgatcgtcgatggcgccggcacagccgat
gacatccaggcccgcgttggccagatcaaggcgcagatcgaggaaaccacctcggactac
gaccgtgagaagctgcaggagcgcctggcgaagctcgctggtggcgttgccgtgatccgc
gttggtggctcgaccgaagtggaagtcaaggaacgcaaggatcgcgtcgatgacgcgctc
aacgcgacccgcgccgctgttgaagaaggcatcgtgccgggtggtggtgttgccctgctg
cgcgcatcggccaacatcaagtccaagggcgccaatgccgatcaggaagccggtatcgca
atcgtgcgccgtgccctgcaggctccggttcgcaccattgccaacaatgccggtgccgaa
ggctcggtcgttgtcgacaagatcctggagaactcggagatctcgttcggctacaacgcc
gcgaccggcgagtatggcgatctggttgttctgggtgttatcgacccggtcaaggtggtt
cgcaccgcccttgaagatgccgcttcggttgcttcgctgctgatcaccaccgaggccatc
atcgtcgaggcccccaagcctgaagctccggcaatgccgggcggcggcggcatgggcggc
atgggcggcatggatttctaa
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