Devosia sp. I507: C4375_07360
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Entry
C4375_07360 CDS
T05346
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
dei
Devosia sp. I507
Brite
KEGG Orthology (KO) [BR:
dei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dei03400
]
C4375_07360 (addA)
Enzymes [BR:
dei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C4375_07360 (addA)
DNA repair and recombination proteins [BR:
dei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C4375_07360 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
UvrD_C
AAA_19
UvrD_C_2
AAA_30
DUF6668
Toprim_2
DEAD
Motif
Other DBs
NCBI-ProteinID:
AVF03559
UniProt:
A0A2L1S556
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All DBs
Position
1544300..1547731
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AA seq
1143 aa
AA seq
DB search
MSDRGDLVVPSDTSASQALAGNPDYSIWVEANAGSGKTFVLTTRVLRLLLAGVTPQSILC
LTYTKAAAAEMRKRVGARLAAWAVADKAALREELTKLTGREPTARLLEDARTLFAKALET
PGGLRILTIHAFCEAVLHRFPIEAGVPFDFAVIEDDRRAQMLLAARESVLAEGLRGGEHA
QAVETLFTLLSDSAITEAIGAALAEGAKLKPVLADLAGAKARLRNVVGVTGTASDIAEEI
VADSALTKPVWQEIMSSFDADPAGRRFIDMVARLDPDRMSAHQLCGLFVTEDKDKVKQPR
ARLLNAAQAKAKPALQALLEDERERVFALESQLSGALLVERSEAVLDVVAAIAARYETEK
RRHALLDFDDLVEKLGDLFSNQALGPWVQYKLDAGIDHILVDESQDTNEQQWRVVNALAE
EFFSGAGAVTRPRSVFAVGDQKQSIYSFQGAQPVLFGQTGRQMARRAGEAEKPFRQVRLH
TSFRTLKGILEAVDRVCDRADIQEALLSDEKIIHQPARSQPGGQVVLWPPVQEEKAERDT
SAWPRVAVEAEQSANRQVALRIAGEIRGWIEKGRVLGERSRTIRADDVLILVQKRGPLFK
EIIRALRSEGLPTPGADRLAVTVHIAVFDLLALIDVLLNPADDLQLAALLRSPLFDLTED
DLYAVAGPRAAGQTLWSALFAAEGEVARLAAGRLGRWRAALDMERPFEFLAGVLYAQGGL
KRFHARLGTEVDDVLSELLELALAHEQGPQPSLQGFAAEMRRRAVTIKRELAESGGGVRV
MTVHGAKGLEAPIVILADATGKPSGSQTGQAVYAIDKAPGPLLLHAASKSQHVPPTAQLR
QEIDAVREREYWRLLYVGMTRAEDELYVTGPLGLKGSLAGSWYDAIEMGLGEALQPVVDA
NGETVAQVFPAVAAPIFQPALRKAISPAPELALSAVPAPTKTPVVAPSYAAITNGGTSVL
ATKADALRDAEAARKEGLALHALLQHLGRVPTAERDSVAPRALETLLPDMAEHYPRIVSK
ALSILGNGAFANLFGPHSRAELPFRVAALRAGQEIWLSGRIDRVVVDDSGVLVVDYKSDA
SVPKGADGVPGNYLTQLGLYALVAGQLFPGRPVRAAILWTELESLMKLPNERLVAACADF
TLR
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcgcggcgatctggtcgtgcccagcgataccagcgccagccaggccttggcc
ggcaacccggattactcgatctgggtggaggccaatgccgggtctggcaagaccttcgtg
ctcaccacccgcgtgttgcgcctgctactggccggggtgaccccgcaatcgatcctgtgc
ctcacctataccaaggcggcggcggcggaaatgcgcaagcgcgtcggcgccaggctggcc
gcctgggccgtcgcggataaagcggcattgcgcgaggagctgacaaagctgaccgggcgg
gaaccgacagcgcggttgctcgaagatgcccggacgctgtttgccaaggcgctggaaacg
ccggggggcctgcgcatcctgaccattcacgccttttgcgaggcagtgctgcatcgcttt
ccgatcgaagcgggggtgccgttcgattttgccgtgatcgaggatgatcgccgggcgcag
atgctgctggcggcgcgcgaaagcgtgctggccgaggggctgcggggcggcgaacatgcg
caggcggtggagaccctgttcaccctgctcagcgacagcgccattaccgaagccatcggg
gcggcgctggcagaaggggccaagctcaagccggtgctggcggacctggccggggccaag
gcgcggttgcgcaatgtggtgggcgtgacgggcacggcgtcggacattgccgaagagatc
gttgcagacagcgcactgaccaaaccggtctggcaggagatcatgtcgagctttgatgcc
gacccggcgggacggcgctttattgacatggtggcgcggctcgacccggaccggatgagc
gcccaccagctttgcgggctcttcgtcaccgaggacaaggacaaggtcaagcagccccgc
gcgcgcctgctcaatgcggcccaggcgaaggccaagccggccttgcaggccctgctggaa
gacgagcgggagcgggtctttgcgctcgagagccagttgtccggggcgctgctggtggag
cgcagcgaagccgtgctcgatgtggtggcggcgattgcggcgcgctacgagaccgagaag
cgccgccatgcgttgctcgatttcgacgatctggtggaaaagctgggggacctgttttcc
aatcaggcgctggggccctgggtgcaatacaagctcgacgccgggatcgaccatattctg
gtcgatgagagccaggacaccaatgagcagcaatggcgcgtggtcaatgcgctggccgag
gagttcttctccggcgccggggcggtgacccgaccgcgctcggtgttcgccgtgggcgac
cagaagcagtcgatctattccttccagggcgcacagccggtgctgttcggacaaaccggg
cggcagatggcccgccgggccggtgaggcagaaaagccattccggcaggtgcgcctgcat
accagtttccgcacgctcaagggcattctggaggcggtggaccgggtctgtgaccgcgcc
gatattcaggaagccttgctttcggatgagaaaatcattcaccagccggcgcggagccag
cctggcggccaggtggtgttgtggccgccggtgcaggaagaaaaggcggaacgcgacacc
agcgcctggccgcgcgtggcggtggaggccgaacagagcgccaaccgacaggtggcactg
cgcattgccggagaaatccggggctggatcgaaaagggccgggtgctgggcgaacggagc
cgcaccatccgcgccgatgatgtcctgatcctggtgcagaagcgcggcccgctgttcaag
gaaatcatccgcgccctgcgcagcgagggcctgcccacgccgggcgccgacaggctggcg
gtgaccgtgcatattgcggtgttcgatttgctggcgctgatcgatgtgctgctcaatccg
gccgacgatctgcaactggcggccctgctccgctcgcccctgttcgacctcaccgaagac
gatctctatgccgtcgccgggccgcgcgcggcgggccagaccttgtggtcggccctgttt
gcagccgagggcgaagtggcccggcttgcggcggggcgacttggccgctggcgggctgcg
ctcgacatggagcggcccttcgagttcctggccggcgtgctctatgcccaaggggggctc
aagcgcttccatgcccggctgggcacggaagtggacgatgtgctctccgaactgctcgaa
cttgcattggcccacgagcaggggccgcagccctcgctgcagggctttgctgccgaaatg
cggcgccgggccgtgaccatcaagcgcgagctggccgaaagcggcggtggcgtgcgggtg
atgacggtgcatggcgccaaggggctggaagctcccatcgtcattctggccgatgccacc
ggcaaacccagcggcagccagaccggacaggccgtctatgccatcgacaaggcccccggc
ccgctgcttttgcatgcagcctcgaaaagccagcatgttcctccgaccgcacaactgcgc
caggagatcgacgccgtgcgtgagcgggaatattggcgtctgctctatgtgggcatgacc
cgggccgaggacgaactctatgtcaccgggccgctggggctgaagggcagcctggcaggc
tcatggtatgacgccatagaaatgggcctgggcgaggcgttgcagccagtggtggacgca
aatggcgagactgtggcgcaagtctttccagcggttgctgcgccgatcttccaaccggcc
ttgcgcaaagcgatcagcccggcgcctgaactggcgctgtccgccgtgccggcaccaacg
aaaacccccgtcgtggcgccgagctatgccgccataacaaatggcggcacctctgtgctg
gccaccaaggccgacgcattgcgcgacgcagaggcggcccgcaaggaaggcctggcgctg
catgccctgttgcagcatctgggccgggtgccaaccgccgagagggacagcgtggcaccc
agggcgctcgaaaccctgctgcctgatatggccgagcattatccgcggatcgttagcaag
gcgctcagtattctgggcaatggggcctttgccaacctgttcggaccgcacagccgcgcc
gagctgccgttccgcgtggcggccctgcgggcggggcaggagatctggctgagcggccgg
atcgatcgagtagtggttgacgactcaggggtgctggtggtggactacaaatccgacgcg
tcggttcccaaaggagcggacggcgtgccggggaactatctcacccagctaggattgtat
gcgttggttgcaggtcagcttttccccggacgaccggtgcgtgcggcaatcctgtggaca
gagttggaatcattgatgaaattgccgaacgagcggcttgttgccgcttgtgcggacttc
accctgcggtga
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