Devosia sp. I507: C4375_16930
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Entry
C4375_16930 CDS
T05346
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dei
Devosia sp. I507
Brite
KEGG Orthology (KO) [BR:
dei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dei03009
]
C4375_16930
Enzymes [BR:
dei01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
C4375_16930
Ribosome biogenesis [BR:
dei03009
]
Prokaryotic type
ribosomal protein modification factors
C4375_16930
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AVF05219
UniProt:
A0A2L1S9Y2
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Position
complement(3452046..3453371)
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AA seq
441 aa
AA seq
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MTQAPKIGLVSLGCPKALVDSERIMTTLRAQGYSFSRDYAGADVVLVNTCGFLDSAKQES
LEAIGEALNENGRVIVTGCLGVEENLIRETHPSVLAITGPHQYESVVNAVHDHVPPVPNK
FVDLVPESGLKLTPRHYAYLKISEGCNNRCSFCIIPQIRGDLASRPAAGILSEAEGLIRS
GVKELLVISQDTSAYGLDIKYAASKYRGREVKAKFYDLAKELGELGAWVRLHYVYPYPHV
DQIMELMAEGLVLPYLDIPFQHASPKVLKAMRRPAHQEKTLNRILDWKRQVPDLTVRSNF
IVGFPGETEEDFEMMLDFIEEAEIDRAGCFKYEPVTGATANEIEGVVPDEVMEERFAQLM
EVAQNVSFGQLQKKVGRTIDVIVDDVRPEQNRVIARSKWDAPEIDGQVIVDQADGIKIGD
IVQVTVTDNDEYDLFAIPAKG
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgactcaggcgcccaaaatcgggctcgtcagcctcggctgccccaaggctctcgtcgac
agcgagcgtattatgaccaccctgcgggcgcagggttattcgttcagccgcgactatgcc
ggggccgacgtcgttctggtcaatacctgcggcttcctcgacagtgccaagcaggaaagc
cttgaagccattggcgaagcgctcaatgaaaacggtcgcgtcatcgttaccggttgcctg
ggcgtcgaggaaaacctgatccgcgagacccatcccagcgtcctcgccatcaccggcccg
caccagtacgaaagcgtcgtcaacgcggtgcatgaccatgtgccgcccgtgcccaacaaa
ttcgtcgacctggtgccggaaagcggcctcaagctgacgccgcgccactatgcctatctc
aagatttccgaaggctgcaacaatcgctgctcgttctgcatcattccgcagatccgcggc
gatctggcctcgcgtcccgccgccggtattctgtcagaagccgaaggcctgatccgctcc
ggcgtcaaggaattgctggtcatctcgcaggacaccagcgcctatggcctcgacatcaaa
tatgccgccagcaaatatcgcggccgtgaggtcaaggccaagttctacgacctggccaag
gagctgggtgaactcggtgcctgggtacgcctgcactatgtttatccctacccccatgtc
gaccagatcatggaactgatggccgaaggcctcgtcctgccctatctcgacattcccttc
cagcacgcttctcccaaggtgctgaaagccatgcgccgcccggcgcatcaggaaaagacg
ctcaaccgcatcctcgactggaagcgccaggttcccgacctcaccgtgcgctccaatttc
atcgtcggcttccccggcgagaccgaggaagatttcgaaatgatgctcgacttcatcgag
gaagccgagatagaccgcgccggctgcttcaaatatgagcccgtcaccggcgccaccgcc
aatgagatcgaaggcgtggtgcccgacgaggtcatggaagagcgcttcgcccagttgatg
gaagtggcgcagaacgtttccttcggccagctccagaaaaaagttggccgtaccatcgac
gtcatcgtcgacgatgtccgccccgagcagaaccgggtcatcgcccgctccaaatgggac
gccccggaaatcgacggccaggtcatcgtcgaccaggcagacggcatcaagatcggcgac
atcgtccaggtcaccgtcaccgacaatgacgaatacgacctgttcgcgatacccgcgaag
ggctga
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