Devosia sp. I507: C4375_19320
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Entry
C4375_19320 CDS
T05346
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
dei
Devosia sp. I507
Brite
KEGG Orthology (KO) [BR:
dei00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
C4375_19320 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dei03019
]
C4375_19320 (rnc)
03009 Ribosome biogenesis [BR:
dei03009
]
C4375_19320 (rnc)
03036 Chromosome and associated proteins [BR:
dei03036
]
C4375_19320 (rnc)
Enzymes [BR:
dei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
C4375_19320 (rnc)
Messenger RNA biogenesis [BR:
dei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C4375_19320 (rnc)
Ribosome biogenesis [BR:
dei03009
]
Eukaryotic type
90S particles
RNase
C4375_19320 (rnc)
Prokaryotic type
rRNA processing factors
C4375_19320 (rnc)
Chromosome and associated proteins [BR:
dei03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
C4375_19320 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AVF05635
LinkDB
All DBs
Position
complement(3951557..3952264)
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AA seq
235 aa
AA seq
DB search
MSRRDKSHEKLQFRLGYRFADPDLLDRALTHSSAISPGKRIERSYQRLEFLGDRVLGLVV
ADMLYRRYPKSNEGELSRSLNTLVRKETCAEIARQLDLGKEMILGESEARSGGADKDAIL
GDVTEAIIGAIYLDGGLEPARNFIERLFEEFLADGQANRADAKTTLQEWAQARGLEPPSY
VLVERTGPDHAPEFTIGVDLVGFARIEAIGPSKKIAEHRAAELFLVDQKVWKPKP
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgagccggcgcgacaagtcccacgaaaagctccagttccggctaggctaccgcttcgcc
gatccggatctgctggatcgcgcgctgacccattcgagcgccatttcaccgggcaagcgc
atcgagcgctcctaccagcgactcgaattccttggcgaccgcgtgctcggcctggtggtt
gccgacatgctctatcgccgctaccccaagtcgaacgagggtgagctgagccgctcgctc
aacacccttgtgcgcaaggagacctgcgccgaaatcgcccgccagctcgatctgggcaag
gaaatgatcctgggcgagagcgaagcccgctccggcggcgccgacaaggacgccattctg
ggcgacgtcaccgaagccattatcggcgccatctatctcgatggcgggctggagccggcc
cgcaacttcatcgagcgcctgttcgaggaatttcttgccgacgggcaggccaatcgcgcc
gacgccaagaccacgctgcaggagtgggcccaggcccgcgggctcgaaccgccatcctat
gttctggtcgagcgcaccggccccgatcacgcgccagaattcaccattggtgtcgatctg
gtcggctttgcacggatcgaggccattggcccgtccaagaagattgccgaacaccgcgcc
gccgaactatttctggtcgaccagaaggtctggaaacccaagccatga
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