Deinococcus sp. D7000: HLB42_03220
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Entry
HLB42_03220 CDS
T10857
Name
(GenBank) DEAD/DEAH box helicase
Organism
deid Deinococcus sp. D7000
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
Motif
Other DBs
NCBI-ProteinID:
QLG09887
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Position
complement(656010..659375)
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AA seq
1121 aa
AA seq
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MKLSRLPPGFGLDTAAQGLALRQEAVQNVRREWTDAGWRAQGTVTENGVAYEASVELLPP
PEQQLRASSCTCGRYRCRHVAALVLATDPPDGPRPAVTPAASTPPTEEALDARTQQWLAG
FGTPGRSTSRGRQFELRYVLRLLPPANGTSAARRVALRLMRLPVRGEVPDLRAAETYAVP
RSLSTAPAFVRRDADLLRLLDLATTPAREPGRYAEELHALGSHPAGDLLIESLLDSGRLC
WDRPERPLTRGPELRGTLSWTSDERGAQSPSLEIADVPDAALLPTPKPWAVQPAAGLLSR
VVADATPEQTARFLSGPTLQPSQATALAHAITASGLGLPIPQTVRVREEALPYTPQLHLM
GRMGTVLVPDRWMMREEQQTLAVAELRHAYGGLLVPDAPVSGLTDVPNPTVYRDGVLTRI
PRDRAQELQAVQALDRAGFSTVAETFDDYTVPAELQDLLTLGDEESWMDFMRVGREDLEE
QGFTLHIHLDFPLNFAEISDWYGEADDSFGGWFTLDLGIVVDGERVSLIPVLADLIARQP
ELFSPEALAALEDDETLFAALGDGRRVALPAGRIRAILGVLVELNLRDLPAGPLRLPLLD
AARLAELEGALKARWVGAERLLELGRKLRDFGGIQPVEPPAGLNAELRPYQLQGLAWLQF
LREYELGGILADDMGLGKTVQTLAHLLTEKNAGRADRPSLVIAPTSVIGNWQAEAAKFAP
GLKVLTLHGKERRDLFGEIGDHDLILSTYPLLPRDLDELRQFGYHLLILDEAQNIKNNKT
AAAKAAGSLDARHRLCLTGTPLENHLGELWSQFNFLSPGLLHDEKTFRELYRTPIEKRGD
ASRRAALAARVRPFILRREKRDVARELPPKTEIPVRVTLDGDQRDLYETVRVTMESRVRE
ELQARGLARSTIAILDALLKLRQAVTDPRLVKLEAARKVEGNAKFDWLQGNLPQMIEEGR
RVLIFSGFATLLGHLETWIKEQGIPYSMITGQTQDRQSQIDAFQRGDTHVFLITLKAGGV
GLNLTAADTVIHYDPWWNPAAEDQATDRAYRIGQDKPVFVYKLIAAGSVEERILELQARK
ASLARGILDGGLSEATQLTSHDLDRLFAPLENEEEEEGVEA
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctcagtcgcctgcccccaggcttcggactggatacggcggcccaggggctggca
ctgcggcaggaagccgtgcagaacgtgcggcgcgagtggaccgatgcgggctggcgggcg
cagggcaccgtgaccgagaacggcgtggcctacgaggcgtcggtggagctgctgccgccg
ccggaacagcaactgcgcgcgtcgtcgtgcacctgcgggcgctaccgctgccgccacgtc
gccgcgctggtgctggcgacggacccgccggacggcccccggcccgccgtcacgcccgcc
gccagcacgcccccgaccgaggaagccctggacgcccgcacccagcagtggctggccggc
ttcggcacgccgggacgcagtacctcgcgagggcggcagttcgaactgcgctacgtgttg
cgcctgctgccgccggccaacggcacgtccgcggcccggcgggtggcgctgcggctgatg
cggctgccggtgcgcggcgaggttcctgacctgcgggccgccgagacctacgccgtgccg
cgcagcctgtcgaccgcccccgccttcgtgcgccgcgacgcggacctgctgaggttgctg
gacctggccaccacccctgcccgcgaaccgggccgctacgccgaggagctgcatgccctc
ggcagtcatccggcgggcgacctgctgatcgagtcgttgctggacagcggacggctgtgc
tgggaccggcccgaacgtcccctgacgcgcggtcccgaactgcgcggcaccctgagctgg
acctccgacgagcggggggcgcagtcaccgtcgctggagattgccgacgtgcccgacgcg
gcgctgctgcccacccccaaaccctgggcggtgcagcccgccgccggtctgctgtcgcgg
gtggtggccgacgccacaccggaacagaccgcccgctttctgtccggccccacgctgcag
ccttcacaggccacggcgctggcgcacgccatcaccgcttcaggcctgggcctgccgatt
ccgcaaacggtccgggtgcgcgaggaagccctgccctacacgccgcagctgcacctgatg
ggccgcatgggaaccgtgctcgtcccggaccgctggatgatgcgtgaggagcagcagacc
ctggcggtggccgagctgaggcacgcctacggcggcctgctggtcccggacgccccggtc
agcgggctgaccgacgtgcccaaccccacggtctaccgcgacggcgtgctgacccgcatt
ccgcgtgaccgcgcccaggaactgcaggccgtgcaggccctggaccgggccggtttcagc
acggtggccgagaccttcgacgactacaccgtgcccgccgaattgcaggacctgctgacc
ctgggcgacgaggagtcctggatggactttatgcgcgtggggcgcgaggacctggaggag
cagggctttaccctgcacatccacctggattttcccctgaatttcgccgagatcagcgac
tggtacggcgaggccgacgactctttcggcggctggttcacgctggacctcgggatcgtg
gtggacggcgagcgcgtcagcctgattccggtgctggcagacctgatcgcccgccagccc
gaactgttctcgcccgaagcgctggccgcgctggaggacgacgagaccctgtttgccgcg
ttgggcgatggccgccgcgtggccctgcctgccggacgaatccgcgcgattctgggcgtg
ctggtggagctgaatctgcgtgacctgcccgctggcccgctgcgcctgccgctgctggac
gccgcccgactggccgaactggaaggtgccctcaaggcccgctgggtgggcgcggaacgt
ctgctggagctggggcgcaagctgcgcgacttcggcggcatccagccggtcgagccgccc
gctggcctgaacgccgagttgcgcccctatcagttgcaggggctggcgtggctgcaattc
ctgcgcgagtacgagctgggcgggattctggccgacgacatgggcctgggcaagacggtc
cagacgttggcccacctcctgaccgagaagaacgcgggccgcgccgaccggcccagcttg
gtgatcgcccccacgtccgtgatcggcaactggcaggccgaggccgccaagttcgcgccg
ggcctgaaggtcctgaccctgcacggtaaggagcggcgcgacctgttcggcgagattggg
gaccatgacctgatcctcagcacctacccgctgctgccgcgcgatctggacgagctgcgg
cagtttgggtaccacctgctgattctggacgaggcgcagaacatcaagaacaacaagacg
gcggcggccaaggcggccggcagcctggacgcgcggcaccggttgtgcctgaccggcacg
ccgctggaaaaccacctgggcgagctgtggtcccagttcaatttcctgtcgccgggcctg
ctgcacgacgagaagaccttccgcgagctgtaccgcacgcccatcgagaaacgtggggac
gcctcgcgccgcgccgcgctggccgcccgcgtgcgcccgttcatcctgcgccgcgagaag
cgcgacgtggcccgcgaactgccgcccaagaccgagattccggtgcgcgtgacgctggac
ggcgatcagcgtgacctgtacgagaccgtgcgcgtgaccatggaaagccgtgtgcgcgag
gaactgcaggcgcgcgggctggcccgcagcaccattgccatcctcgacgcgttgctgaag
ctgcgtcaggcggtcacggacccgcgtctggtcaagctggaggccgcccgcaaggtggaa
ggcaacgccaagttcgactggcttcagggcaacctgccgcagatgatcgaggagggccgc
cgggtgctgatcttcagcggcttcgccacgctgctgggccatctggaaacgtggatcaaa
gaacagggcatcccgtactcgatgatcaccggccagacccaggaccgccagtcccagatc
gacgccttccagcgcggcgacacgcacgtcttcctgattactctcaaggccgggggcgtg
ggcctgaacctcaccgctgccgacacggtgattcattacgacccgtggtggaatccggcc
gccgaggatcaggccacggaccgcgcctaccggattggacaggacaagccggtgttcgtg
tacaagctgatcgcggcgggcagcgtggaggaacgcattctggagttgcaggcccgcaag
gccagtctggcgcgcggcatcctggacggcggcctgagcgaggcgacacagctcacgtcc
cacgatctggaccgcctgttcgccccattggagaacgaggaggaggaggaaggggtggag
gcttga
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