Deinococcus sp. D7000: HLB42_04075
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Entry
HLB42_04075 CDS
T10857
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
deid Deinococcus sp. D7000
Brite
KEGG Orthology (KO) [BR:
deid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
deid03032
]
HLB42_04075
03036 Chromosome and associated proteins [BR:
deid03036
]
HLB42_04075
03400 DNA repair and recombination proteins [BR:
deid03400
]
HLB42_04075
DNA replication proteins [BR:
deid03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HLB42_04075
Chromosome and associated proteins [BR:
deid03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HLB42_04075
DNA repair and recombination proteins [BR:
deid03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HLB42_04075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
DUF2780
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QLG10037
LinkDB
All DBs
Position
complement(839662..840003)
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AA seq
113 aa
AA seq
DB search
MAKSTKAATKPAAKATPTRSANSKIAKTQIIDMVADKTSLNKKQAGEAVAAVLTSVVTAL
QGGKSVGLPGLGTLSVTQTVARTGVRPGTSQKITIPAGKKIRFKVASTLKGTL
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaagcaccaaagccgccacgaaacccgccgccaaagccacgcccacaagaagt
gccaacagcaagatcgccaagacccagatcattgacatggtggccgacaagaccagcctg
aacaaaaagcaggccggcgaagcggtcgccgccgtcttgacgagcgtggtcacggccctg
caaggtggcaaaagcgtcggcctgccaggtctgggcaccctcagcgtgacccagaccgtg
gcgcggacgggcgttcggcccggcaccagccagaaaattaccattcccgctggcaagaaa
atccgcttcaaagtggccagcaccctcaaagggacgctgtaa
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