Deinococcus sp. D7000: HLB42_05000
Help
Entry
HLB42_05000 CDS
T10857
Name
(GenBank) hypothetical protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
deid Deinococcus sp. D7000
Pathway
deid02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
deid00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HLB42_05000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
deid02000
]
HLB42_05000
Transporters [BR:
deid02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HLB42_05000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QLG10194
LinkDB
All DBs
Position
1021363..1023036
Genome browser
AA seq
557 aa
AA seq
DB search
MKRSLPLLTLALIASSALATPKDALVYQIASATASVEPTQAVVTYDVLPVQQMFEGLYLN
NFGKYEPLLATSFTQSKDGKVTTFTLRKNVKFHDGTGMTCADAEYSLRRTFLVGSETSLA
AQIRANLLSIPGFTPDVKKTYTFAKLANTVKCNAAGQLVLTLDRNVPSLLDSITQTYIVP
MKTLVAGGDWSGTAKDFGAFLGKDVSNSVMAQKPVGTGAYGFVARDPSRFVMKAFDGYWG
GAPALKNVILQKVDSDTARVLALQKGDADIALIPDRDTLAKLKGVSGVTVYEDLPTRDLT
SVVLFNQNIKDDKLLPAGQLAENNIPANFFSDIHVRKAFAAMFDTKTFVKDGLQGFGLSR
NTTLPPNNWADDKTLKPPAYSLKTAEAELKQAFGGKLWTTGFTIPLSTFGGSGLSQVVAG
IYKQNIEQLNPKFHATVSTLELSAANASLLGGKLPFGALTWGGADPDTNLRGLYSSGGIL
GAATNIKDPKMEQMLDRARDTVGQSARKPLYKALLTYLNAQTYALPLPQPLVFAATTSAL
KGYPEFNKTNLFRVLSK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgttccctgcccttactgacgctggccctcatcgcttcaagtgccctggcaacc
ccgaaggacgcgctggtctaccagatcgcctcggccaccgccagcgtggaacccacgcag
gccgtcgtgacctacgacgtgctgcccgtccagcagatgttcgaggggctgtacctcaac
aacttcggcaagtacgagccgctgctcgccacctcctttacccagagtaaggacggcaag
gtcacgacctttaccctgcgcaagaacgtgaagttccacgacggcactggcatgacctgc
gccgacgcggaatattcgctgcgccgcaccttcctggtgggcagtgaaacctcgctggcc
gcgcagattcgcgccaacctgctgagcattcccggcttcaccccggacgtcaagaagacc
tacaccttcgccaagctggcgaacaccgtcaagtgcaacgcggcgggccaactggtgctg
acgctggaccgcaatgtgcccagcctgctcgactccatcacccagacctacatcgtgccg
atgaagacgctggtggccggcggcgactggagcggcacggccaaggatttcggcgccttt
ctgggcaaagacgtgtccaactcagtgatggcacagaagccggtgggcaccggggcgtac
gggttcgtggcgcgcgatcccagccgcttcgtgatgaaggcctttgacggctactggggc
ggcgcacccgcgctgaaaaacgtgatcctacaaaaggtggacagcgacaccgcccgcgtg
ctggccctgcaaaaaggcgacgccgacattgcgctgatcccagaccgcgacaccctggcc
aagctcaagggcgtgtccggcgtgaccgtgtacgaggacctgcccacccgtgacctgacc
agcgtggtgctgttcaaccagaacatcaaggacgacaagctgctgcccgccggtcagctg
gccgagaacaacatccccgccaactttttcagcgacattcacgttcgcaaggcgttcgcg
gcgatgttcgacaccaagacctttgtcaaagacggcctgcaaggctttggtttgagccgc
aacaccaccctgccgccgaacaactgggccgacgacaagaccctgaagccccccgcctac
agcctcaagaccgctgaggccgaactcaagcaggcgttcggcggcaagctgtggaccacc
ggcttcaccattcccctgtccaccttcggtggcagtgggctgtctcaggtggtggccggc
atctacaagcagaacatcgagcaactgaatcccaagttccacgccacggtcagcaccctg
gaattgagtgcggccaacgcgtccttgctggggggcaagctgcccttcggggcgctgacc
tggggcggcgcggaccctgacaccaacctgcgcgggctgtacagttccggcggcatcctg
ggcgcggccaccaacatcaaggatcccaagatggagcagatgctggacagagcccgcgat
accgtggggcaaagtgcccgcaaaccgctgtacaaggcgctgctgacgtacctcaacgcg
cagacctacgcgctgccgctgccgcagccgctggtgtttgccgccaccacctcggccctc
aagggctacccggaattcaacaagaccaacctgttccgggtgctgagcaagtag
DBGET
integrated database retrieval system