Deinococcus sp. D7000: HLB42_05610
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Entry
HLB42_05610 CDS
T10857
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
deid Deinococcus sp. D7000
Pathway
deid03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
deid00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HLB42_05610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
deid03021
]
HLB42_05610
03400 DNA repair and recombination proteins [BR:
deid03400
]
HLB42_05610
Enzymes [BR:
deid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HLB42_05610
Transcription machinery [BR:
deid03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HLB42_05610
DNA repair and recombination proteins [BR:
deid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HLB42_05610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
RNA_pol_L_2
IMS_HHH
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QLG10304
LinkDB
All DBs
Position
1143394..1144407
Genome browser
AA seq
337 aa
AA seq
DB search
MDQKRPQLKARVDGDYGEFVLEPLTRGYGVTIGNPIRRILMSSIPGTAVTSVYIEDVLHE
FSTIPGVKEDVIQMILNLKELVVKFHAPGPKTLTLRAQGEGVVKASAFEVPSDAEIVNPD
LVIATLAEDGKLVMEVRVEEGEGYVPADKHATKDRINSIPVDAVFSPVRRVAYHVENTRV
GQQTDLDRLILRVWTDGSTGPQDTLDKAVEILREELNVFGNVENLPALTPEFSQQPVYTP
TTPVMPQPGVYDLPSAPAALNLNPGDYPAEMDSPRVTLEGLGLTTRVLHSLKEEGIDSVD
ALCALSDRDLKKVPGIGERSLDEIKQQLAQFGLALRD
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtggatcaaaagcgccctcaacttaaagcccgcgtggacggcgattacggcgagttcgtc
ctggagccgctcacgcgcggttacggcgtcaccatcgggaaccccatccggcgcatcctg
atgtcctcgatccccggcacggctgtcaccagcgtgtacatcgaagacgtgctgcacgaa
ttctccaccattcccggagtcaaggaggacgtcattcagatgatcctcaacctcaaggaa
ctggtcgtgaagttccacgcccccggtcccaagaccctgaccctgcgcgcgcagggcgag
ggtgtggtcaaggccagcgccttcgaggtgcccagcgacgccgagatcgtcaaccccgac
ctggtgatcgccaccctggctgaggacggcaagctggtcatggaagtgcgcgtggaagaa
ggcgagggctacgttcccgccgacaagcacgccaccaaggaccgcatcaactcgattccg
gtggacgctgtgttctccccggtgcgccgcgtggcctaccacgtcgagaacacccgcgtg
ggtcagcagaccgacctggaccggttgatcctgcgcgtctggaccgacggctcaaccggc
ccgcaggacaccctggacaaggcggtggagattctgcgcgaggagctgaacgtgttcggc
aacgtggagaacctgccggccctgaccccggaattcagccagcaaccggtctacacgccc
accaccccggtgatgccccagcccggcgtgtacgatctgccctccgctcccgccgcgctg
aacctgaaccccggcgactaccccgccgagatggattcgccgcgcgtgaccctggaaggc
ctggggctgaccacccgcgtgctgcattccctcaaggaagaaggcatcgacagcgtggac
gccttgtgcgcgctgtcggaccgtgacctgaagaaggtgcccggcatcggcgaacgcagc
ctggacgagattaagcagcagctggcccagttcgggctggcgctgcgcgactaa
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