Deinococcus sp. D7000: HLB42_05660
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Entry
HLB42_05660 CDS
T10857
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
deid Deinococcus sp. D7000
Pathway
deid02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
deid00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HLB42_05660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
deid02000
]
HLB42_05660
Transporters [BR:
deid02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HLB42_05660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QLG10312
LinkDB
All DBs
Position
complement(1154263..1155897)
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AA seq
544 aa
AA seq
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MNSTVKTILSLSLILTAALGSAAHAQNPKSTFTIVRSTQWGAENYNPFVPGDQHLLPTNS
AIYESLFFVNSINGKVTPVLGTKYAWSKDNKTLTVTTRPNVKWTDGQAFSANDAAFSFNY
LKANPALDTNGLWKGGLSAVKATNPTTLVFSFSAANTPMFQFIANTPIVPQHLWKDVKDP
STFANTKPVGTGPFMADSYSQQALRVLKNPNYWMPNQPYVDALVWVATSTNDAAQLKLLS
GEADFGYVGISDPKAYAAKSPNASYWWPTNNINFLYFNTVKAPFNDVAFRRAVAAAIDTR
EVAQKAYAGAVPAASPAAIFPGQQKQWLSGAVKPTFDVAAADKVLTAAGYKKDSNGNRLG
KDGKALPSFKILVGAGWTDFITMAQVIGNNLKKVGINTSIDQQAWGSYSGGLQTGSYDMG
ISWGWGNGSTPFYTFNAAFNPDFSAPVGKTAPSNLSRYTNPAITNALKAFRTTSDQAAQQ
KAVSTIVSAVMKDQPWVPLTDRVNFGLFNTSKFTGFPSAENPYNDSSPDDTNGARLLYLN
VKPK
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcactgtcaagacgattctttccctgtccctgatcctgaccgccgccctgggc
agcgccgcacacgcccagaatcccaagtccacgtttaccatcgtgcgctcgacgcagtgg
ggggcggagaactacaaccccttcgtgcccggcgaccagcatctgctgcccaccaactct
gccatttacgagagcctgttcttcgtcaactcgatcaacggcaaggtcacgccagtgctg
ggcaccaaatacgcctggagcaaggacaacaagaccctgacagtgaccacccgtcccaat
gtcaagtggacggacggccaggccttcagtgccaatgacgccgccttcagcttcaattac
ctcaaggccaatccggccctggacaccaacgggctgtggaagggcggcctgagcgcggtc
aaggccaccaatcccactaccctggtcttcagtttctctgccgccaacacgcccatgttc
cagttcatcgccaacacgcctatcgtgccccagcatctgtggaaggacgtgaaggatccc
agcacctttgctaacaccaagccggtgggcacggggccgttcatggcggacagctacagc
cagcaggcgctgcgggtgctcaagaaccccaactactggatgcccaaccagccctacgtg
gacgcgctggtgtgggtggcgaccagcaccaacgacgcggcccagctcaagttgctcagc
ggcgaggccgatttcggttacgtgggcatttccgatcccaaggcctacgcggccaagagc
cccaatgcaagctactggtggcccaccaacaacatcaatttcctgtatttcaatacggtc
aaagcgccgttcaatgacgtggccttccgcagggccgtggccgccgccatcgacaccagg
gaagtggcgcagaaggcgtatgccggcgcagttcctgcggccagccccgccgccatcttc
cccggtcagcagaagcagtggctgtccggcgccgtcaagcccaccttcgacgtggccgcc
gccgacaaggtgctgacggctgccgggtacaagaaagacagcaacggcaaccgtctgggc
aaggacggcaaggcgctgcccagcttcaagattctggtgggcgcgggctggacggacttt
attaccatggcacaggtgatcggcaacaacctcaagaaagtgggaatcaacaccagcatc
gaccagcaggcgtggggcagctactccggcggcctccagaccggcagctacgacatgggc
atcagctggggctggggcaacggctcgacgccgttctataccttcaacgccgccttcaac
ccggacttctcggccccggtgggcaaaacggcccccagcaacctgtcgcgctacaccaac
ccggccatcaccaacgccctgaaggccttccgcaccaccagcgatcaggccgcgcagcaa
aaggccgtctccaccatcgtcagcgcggtcatgaaggaccagccctgggtgccgctgacg
gaccgcgtgaacttcggcctgttcaacaccagcaaattcaccggcttccccagcgccgag
aacccctacaacgattcctcccctgacgacaccaacggcgcgcggctgctgtacctgaac
gtcaagcccaagtaa
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