Deinococcus sp. D7000: HLB42_05745
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Entry
HLB42_05745 CDS
T10857
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
deid Deinococcus sp. D7000
Brite
KEGG Orthology (KO) [BR:
deid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
deid03016
]
HLB42_05745 (truB)
Enzymes [BR:
deid01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HLB42_05745 (truB)
Transfer RNA biogenesis [BR:
deid03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HLB42_05745 (truB)
Prokaryotic type
HLB42_05745 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QLG10328
LinkDB
All DBs
Position
complement(1171736..1172662)
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AA seq
308 aa
AA seq
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MPVIAVDKPLHLTSHDVVNRARRARKTKRVGHTGTLDPLATGVLVLAVEGSTKVVQFMEA
DSKDYLAWISLGAGTPTLDAEGPVDETADVPPLGEATIRAVLTTFTGPQKQIPPQYSAIQ
VGGQRAYAVARAGGELDLPARDVVIHSLDLLGVYGRVQDAPRTFDAQSWAPADTGLTFTL
PDALGEFPTLLLRASVGSGTYLRSLARDVGAALGLPAHLSGLVRTRVGRYSLADAVALED
LEGATGLSDLNALDFPRIEADAAMACELRQGKRPRRSEVGRHVVTLDGELVAVVDGDGEG
LKVVRAWA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgattgccgtcgacaaaccgctgcacctgacctcgcacgacgtggtgaaccgc
gcccgccgcgcccgcaagaccaaacgggtggggcacaccggcaccctcgatccgctggcg
acgggggtgctggtgctggcggtcgagggcagcaccaaggtggtgcagttcatggaggcc
gacagcaaggactacttggcctggatcagcctgggcgcaggcacgccgacgctggacgcc
gaggggccggtggatgagacggcagatgtgccgccgctgggcgaggctacgatacgcgcc
gtccttactacgttcactggccctcagaaacagattccaccgcagtacagcgccattcag
gtgggcgggcagcgggcctacgcggtggcgcgggccgggggcgagcttgacctgcctgca
cgcgacgtggtgattcactcgctggacttgctgggcgtgtatggccgggtgcaggacgca
ccgcgtacctttgacgcgcagagttgggcgccagccgacactggcctgaccttcacgctg
cccgacgcgctgggcgagtttcccaccctgctgctgcgcgccagcgtgggcagcggcacc
tatctgcgctcgctggcgcgggatgtgggcgcggccttgggcctgcccgcccacctctcg
ggtctggtgcggacacgggtggggcgctacagcctcgcggacgcggtggccttggaagac
ttagagggagccactggcctgagcgatctgaatgccctggactttccgcgcattgaggcg
gacgcggcgatggcctgcgaactgcgccagggcaagcggccccggcgttcagaagtggga
cgacatgtggtgacgctggatggcgaactggtggccgtggtggacggcgacggcgagggg
ttgaaagtggtgcgggcctgggcgtaa
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