Deinococcus sp. D7000: HLB42_06010
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Entry
HLB42_06010 CDS
T10857
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
deid Deinococcus sp. D7000
Pathway
deid03030
DNA replication
deid03430
Mismatch repair
deid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
deid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HLB42_06010 (dnaX)
03430 Mismatch repair
HLB42_06010 (dnaX)
03440 Homologous recombination
HLB42_06010 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
deid03032
]
HLB42_06010 (dnaX)
03400 DNA repair and recombination proteins [BR:
deid03400
]
HLB42_06010 (dnaX)
Enzymes [BR:
deid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HLB42_06010 (dnaX)
DNA replication proteins [BR:
deid03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HLB42_06010 (dnaX)
DNA repair and recombination proteins [BR:
deid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HLB42_06010 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
AAA_22
DnaX_C
RuvB_N
AAA_30
AAA_5
AAA_14
AAA_16
Mg_chelatase
DNA_pol3_gamma3
nSTAND3
GntR
Motif
Other DBs
NCBI-ProteinID:
QLG10375
LinkDB
All DBs
Position
complement(1222407..1224773)
Genome browser
AA seq
788 aa
AA seq
DB search
MSAIYQRARPIRWDQVVGQEHVKDVLKAALEAGRVGHAYLFSGPRGVGKTTTARLIAMTA
NCTGPAPKPCGECDSCLSVRAGSHPDVMEIDAASNNSVDDVRDLRELVGLAAMRGGKKIY
ILDEAHMMSRAAFNALLKTLEEPPGHVIFILATTEPEKIIPTILSRCQHYRFRRLTPEEI
AGKLAGLATQEGMTAEPEALNLIGRLADGAMRDGESLLERMLAAGSAVTRAGVEEALGLP
PGERVRAVAAALVTGDVGAALQGAGRLYRDGFAARTVVEGLVSALGAALHAELGLDDEGR
LDGADVPRLLKLQAALDGQEARFARSADGQSLELALTHALLAADGGGAGSGTGGPRERPS
GDRGAGGHAAAIPADLLQRLNRMEKELAGLRAGGGAAAPQDRRGPAPAREPVREAVAAIQ
ENSQAHGEAHPPQQDAAPQGNWADVVRAASMQLRAFLKPARMHAEAGYVSLIYDDKNAFH
AKQALNKFDDISALALRVFGPVTFELITAEATKKQKLGGGTVPQGTAPALQPAPIPRSAP
AQAAPAPQASAEAAAGIEIAPFDPTPRRASRAAEGPGPQAGASPSPQATPPQSGLPPRPA
AVATLDPPGSVPPPRPQTRPPETRVPETRLSRPASPDDVAPAPLPTIDADPWQAEHVAAA
PPPPAGAAPAEARAAARELYVVEPIDVEPDWDDIGGPLDAAGPAGPADLDDAPYASLAVE
RPAPAPRSAAPPVQPASAAPSRPGDIRAHPMYEEIRGRFSGRVREIGKNRNPVAPATEGE
TEDEDAEA
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccatctaccagcgcgcccgccccatccgctgggatcaggtggtgggccaggaa
cacgtcaaagatgtgctgaaggccgcgctggaggccgggcgcgtgggccacgcctacctg
ttttccgggccgcgcggcgtgggcaagaccaccacggcccggctgatcgccatgactgcc
aactgcaccggccccgcgccaaagccctgcggtgaatgcgactcgtgcctgagcgtgcgc
gcgggttctcaccccgacgtgatggaaatcgacgccgccagcaacaacagcgtggacgac
gtgcgcgacctgcgcgaactggtggggctggcggccatgcgcggcggcaagaagatctac
attctggacgaggcgcacatgatgtcgcgggcggccttcaacgccctcctcaagacgctg
gaggagccgccgggccacgtcatcttcatcctggcgaccaccgagccggaaaagatcatt
cccaccattctctcgcgctgccagcactaccgtttccgccgcctgacgccggaggagatc
gccgggaaactggcggggctggcgacgcaggagggcatgaccgccgagccggaggccctg
aacctgatcgggcggctggccgacggggccatgcgcgacggcgagagcctgctggagcgc
atgctggcggcgggcagtgcggtcacgcgggccggggtggaagaggcgctggggctgccg
cccggcgagcgcgtgcgggccgtcgcggcggcgctggtgaccggggacgtgggcgcggcc
ctgcagggggccgggcggctgtaccgcgacggcttcgcggcccgcacggtggtggagggg
ctggtctcggcgctgggcgcggccctgcacgccgaactgggtctggacgacgagggacgg
ctggacggcgcagacgtgccccggctgctgaagctgcaggcggcgctggacgggcaggag
gcccgcttcgcccgctccgccgacgggcagagtctggagctggccctgacccacgccctg
ctggccgccgatggtggtggtgcgggcagcggcaccggggggccgagggaacggccttca
ggtgaccggggggcggggggccacgcggcggccattccggcggacctgctgcagcgcctg
aaccgcatggaaaaggaactggccggtttgcgggcaggcggcggcgcggccgccccccag
gaccgccgaggccccgcccctgcccgcgaacccgtgcgcgaggcggtggcggcgattcag
gaaaacagtcaagcgcacggcgaggcccaccccccccagcaggacgcggcgccccagggc
aactgggccgacgtggtgcgggcggccagcatgcagctgcgcgccttcctgaagcccgcg
cgcatgcacgccgaggccggctacgtcagcctgatctacgacgacaagaacgcatttcac
gccaagcaggccctgaacaagttcgacgacatctcggccctggccctgcgggtgttcggc
ccggtcaccttcgagctgatcacggcggaggccaccaagaagcagaagctgggcggcggg
accgtccctcagggcactgccccagccctccaacctgcgcccataccgcgcagtgccccc
gcacaggccgccccagccccgcaggccagcgccgaagccgccgccggaatcgagattgcc
ccctttgaccccacgccgcgccgtgccagccgggccgccgaggggcctggaccgcaggcg
ggggcgtctccctcgccgcaggccacgcccccgcagagcggcctgcccccccgcccggcc
gcggtggctacgctggatccacccggcagcgttcctccgccccggccccagacgcggcct
cctgagacccgcgtgcccgagacacgtctctcccgccccgccagcccggacgacgtggcc
cccgccccgctgcccaccatcgacgccgacccctggcaggcggagcatgtggccgccgcg
cccccaccccccgcaggcgcggccccggcggaagcccgcgccgccgcacgcgagctgtac
gtcgtggagccgattgacgtcgaacccgattgggacgacatcggcgggccactcgacgcg
gcgggaccagctggcccagccgatctggacgacgcgccgtacgccagtctggcggtggag
cggcccgccccggcgccgcgttcggccgcgccgcccgtgcagccggccagcgccgcgccg
tcacgccccggcgacatccgcgcgcatcccatgtacgaggagatcaggggccgcttcagc
gggcgcgtgcgcgagatcggcaagaaccgcaatccggtggccccggcgacagagggcgag
accgaagatgaggacgccgaggcctag
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