Deinococcus sp. D7000: HLB42_07020
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Entry
HLB42_07020 CDS
T10857
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
deid Deinococcus sp. D7000
Pathway
deid00260
Glycine, serine and threonine metabolism
deid00460
Cyanoamino acid metabolism
deid00630
Glyoxylate and dicarboxylate metabolism
deid00670
One carbon pool by folate
deid00680
Methane metabolism
deid01100
Metabolic pathways
deid01110
Biosynthesis of secondary metabolites
deid01120
Microbial metabolism in diverse environments
deid01200
Carbon metabolism
deid01230
Biosynthesis of amino acids
deid01240
Biosynthesis of cofactors
deid04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
deid00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HLB42_07020
09102 Energy metabolism
00680 Methane metabolism
HLB42_07020
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HLB42_07020
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HLB42_07020
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HLB42_07020
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HLB42_07020
Enzymes [BR:
deid01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HLB42_07020
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
RmlD_sub_bind
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QLG10546
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Position
complement(1433382..1434608)
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AA seq
408 aa
AA seq
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MTTAERPVPVRDDAIFDLIAQEAERQRTGLELIASENFTSAAVREAAGSVLTNKYAEGYP
GKRWYGGCEVVDQVELLAIERAKELFGATWANVQPHSGSSANIAVYGALLSPGDTVLGMD
LSHGGHLTHGSPVNFSGKNYEIVSYKVSPETELIDLDEVRRLAHEHKPKMIIAGASAYSR
VIDFEAFRTIADEVGAILFADIAHIAGLVAAGVHPSPLPHAHIVASTTHKTLRGPRSGLL
LSSDPDIAAKMDRSVFPGHQGGPLEHIIAAKAIAFGEALQPDFKAYAQQIVKNAQALAAA
FQDKGYRVVSGGTDNHLFLLDLRPQGLNGTKATRALDANHITISKSTLPYDTEKILHGGG
IRIGTPAVTTRGMVEADMPKIADLIDRALKGEDVKAEVHAFAGGFPLP
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgccgaacgccccgtgcccgtccgtgacgacgccatttttgacctgatcgcg
caggaggccgagcgccagcgcaccgggctggaactgatcgcctccgagaacttcaccagc
gccgccgtgcgcgaggcggcgggcagcgtgctgaccaacaagtacgccgagggctacccc
ggcaagcgctggtacggcggctgtgaagtggtggatcaggtggaactgctggcgattgaa
cgggccaaggaactgttcggcgccacctgggccaacgtgcagccccacagcggcagcagt
gccaacatcgcggtgtacggcgcgctgctgtcgcccggcgacaccgtgctgggcatggac
ttgtcgcacggcggccacctgacgcacggcagcccggtgaacttcagcggcaagaactac
gagatcgtgagctacaaggtcagccccgaaaccgaactgatcgacctggacgaggttcgc
cggctggcgcacgagcacaagccgaaaatgatcatcgccggggccagcgcctacagccgc
gtcatcgatttcgaggcgttccgcaccattgccgacgaggtgggcgccatcctgttcgcc
gacatcgcgcacattgccggactggtggccgccggggtgcatcccagcccgctgccgcac
gcgcacatcgtcgccagcaccacgcacaagaccctgcgcggcccccgcagcggcctgctc
ctgagcagtgacccggacatcgcggccaagatggatcgctcggtgttccccggtcatcag
ggtgggccgctggaacacatcatcgcggccaaggcgattgccttcggtgaggcgctgcaa
cccgacttcaaggcctacgcccagcagatcgtgaagaacgcgcaggcgctggccgccgcg
tttcaggacaagggctaccgcgtggtctcgggcggcaccgacaaccacctgttcctgctg
gatctgcgcccgcaggggctgaacggcaccaaggccacgcgggcgctggacgccaaccac
atcaccatctccaagtccacgctgccctacgacaccgagaagatcctgcacggcggcggc
atccgcatcggcacgcccgccgtgaccacgcgcggcatggtggaggccgacatgcccaaa
atcgccgacctgatcgaccgggcgctgaagggcgaggatgtgaaggccgaggtgcacgcc
ttcgcgggcggcttcccgctgccctga
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