Deinococcus sp. D7000: HLB42_09170
Help
Entry
HLB42_09170 CDS
T10857
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
deid Deinococcus sp. D7000
Brite
KEGG Orthology (KO) [BR:
deid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
deid03016
]
HLB42_09170
Enzymes [BR:
deid01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HLB42_09170
Transfer RNA biogenesis [BR:
deid03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HLB42_09170
Prokaryotic type
HLB42_09170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QLG10918
LinkDB
All DBs
Position
complement(1910055..1911128)
Genome browser
AA seq
357 aa
AA seq
DB search
MSLVFEWAALRALTEDGGTGGTLRGVPQDFRVEEVPAYPLSGEGDHLYLHLEKTGHTTAH
VLRELGTQLGVRDRDIGVAGLKDRHAVTTQWISVPAKYERRLGELAVDGVRILDTTRHGN
KLGMGHLRGNRFVVRVRDAAGGAAQAGATLHTLSAYGVPNYFGPQRFGLGGLNAEEGLRV
LRGESRLRDPRVRRFLISSVQSAVFNAFLSLRLERGVFASLLAGDMAKKHDTGGVFLVEE
AAAESPRAERGEVSATGTLFGKKTKPLTLDAGALEAEALAVFDLTPAVFASRRGDRRLTR
VFPEEASVTPQDDGYTLAFTLPKGSFATSVLREVMKTEVDTAEPEDTEGMDDVGEAE
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
gtgagtctggtgtttgaatgggcggcgctgcgggcgttgacggaagacgggggcaccggc
ggaacgctgcggggggtgccgcaggatttccgggtggaggaggtgccggcctacccgctg
tcgggcgagggcgatcacctgtacctgcacctggaaaagaccgggcacaccaccgcacac
gtgctgcgcgaactgggcacccagctgggcgtgcgtgaccgcgacatcggcgtggcaggc
ctgaaagaccggcacgcggtgaccacccagtggatcagcgtgcccgccaagtacgagcgg
cggctgggtgagctcgccgtggacggcgtgcggattctggacaccacccggcacggcaac
aagctgggcatgggccacctgcgcggcaaccgcttcgtggtgcgcgtgcgggacgcggcg
ggcggcgcggcgcaggccggggccaccctgcacacgctgagcgcctacggcgtgcccaac
tacttcggcccgcaacgcttcggtctgggcggcctgaacgccgaggaagggctgcgcgtg
ctgcgcggcgaatcgcgcctgcgtgacccgcgcgtgcgccgcttcctgatctccagcgtg
cagagcgcggtgttcaacgcttttctcagcctgcgtctggaacgcggcgtgttcgcgtcg
ctgctggcgggcgacatggcgaagaagcacgacacgggcggcgtctttctggtggaggaa
gccgccgccgagtcgccgcgcgccgaacgcggcgaggtcagcgccaccggcacgctgttc
ggcaagaagaccaaaccgctgaccctggacgcgggggcgctggaggccgaggcgctggcc
gtgtttgacctgacccccgccgtctttgcctcgcggcgcggggatcgccgcctgacccgc
gtgttccccgaagaggccagcgtcaccccacaggacgacggctacaccctggccttcacc
ctgcccaagggcagtttcgccaccagcgtcctgcgtgaggtgatgaagaccgaggtggac
accgccgagccagaggacaccgagggcatggacgacgtgggggaagcggaatga
DBGET
integrated database retrieval system
