Deinococcus sp. D7000: HLB42_12535
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Entry
HLB42_12535 CDS
T10857
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
deid Deinococcus sp. D7000
Pathway
deid00521
Streptomycin biosynthesis
deid00523
Polyketide sugar unit biosynthesis
deid00525
Acarbose and validamycin biosynthesis
deid00541
Biosynthesis of various nucleotide sugars
deid01100
Metabolic pathways
deid01110
Biosynthesis of secondary metabolites
deid01250
Biosynthesis of nucleotide sugars
Module
deid_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
deid00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HLB42_12535 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HLB42_12535 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HLB42_12535 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HLB42_12535 (rfbB)
00525 Acarbose and validamycin biosynthesis
HLB42_12535 (rfbB)
Enzymes [BR:
deid01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HLB42_12535 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
NAD_binding_4
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_10
KR
NmrA
Metalloenzyme
Motif
Other DBs
NCBI-ProteinID:
QLG11512
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All DBs
Position
2579467..2580507
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AA seq
346 aa
AA seq
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MPQTIPENLLITGGCGFIGSNFVRYWLAQHPESRVVVYDKLTYAGRKENLADLWDDARLT
LVVGDIGDQALVRATCQQEGIDLIVNFAAETHVDQSILGPLVFTDTNVRGTHVLLEVARE
LNIRLHHISTDEVYGHIRDDHQSVETDELAPRSPYAASKAAADQLVQAYAITYGLPVTIT
RGANNVGPYQYPEKAVPLFSTNALLGEAIPVYGDGLQMRDYAHVYDHCTGIEAVLLRGEI
GEVYNVGTGREMTNLEMVDIVLDTLGKSHELVRHVTDRAGHDRRYSMNVDKLKTLDWQPK
YDPKEAVAEAAKWYAENRTWWEPIRSGQFREYYEKQYAERLAGTAQ
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagaccatcccagaaaatttgctcattaccggaggctgcggcttcatcggcagc
aacttcgtacgttactggctggcgcagcaccccgaaagccgcgtggtggtgtacgacaag
ctgacctacgcaggccgcaaggagaatctggcggacctgtgggacgacgcccggctgaca
ctggtggtgggcgatattggcgatcaggcgttggtgcgggccacctgccagcaggaaggc
attgacctgatcgtcaacttcgccgccgagacccacgtggaccagagcatcctggggcca
ctggtgttcaccgacaccaacgtacgcggcacccatgtattattggaagtggcccgcgaa
ctgaacatccgcctgcaccacatcagtaccgacgaggtctacgggcatatccgcgatgac
caccagagcgtggagaccgacgaattggcgccccgcagtccctacgccgccagcaaggcc
gccgccgatcaactggtgcaggcgtatgccatcacttacggtctgccggtgaccatcacg
cgtggggccaacaacgtggggccgtaccagtatccggaaaaagccgtgccgctgttctcc
accaacgcccttctgggcgaggccatcccggtgtacggcgacggtctccagatgcgcgac
tacgcccacgtgtatgaccactgcacgggcatcgaggctgtactgctgcgcggtgagatt
ggcgaggtctacaacgtgggcaccggacgtgagatgaccaacctggaaatggtggacatc
gtgctggataccctgggcaagtcgcatgagctggtccggcatgtgacggaccgcgccggt
catgaccggcgctacagcatgaacgtggacaagctcaaaacgctggattggcagccgaaa
tacgatccgaaagaagccgtcgctgaagccgcgaagtggtacgccgagaaccggacgtgg
tgggagccgattcgcagcggtcaattccgcgaatactatgaaaagcagtacgccgagcgc
ttggccggaactgcccagtga
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