Deinococcus sp. D7000: HLB42_16115
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Entry
HLB42_16115 CDS
T10857
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
deid Deinococcus sp. D7000
Pathway
deid02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
deid00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HLB42_16115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
deid02000
]
HLB42_16115
Transporters [BR:
deid02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HLB42_16115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QLG12137
LinkDB
All DBs
Position
complement(3341963..3343441)
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AA seq
492 aa
AA seq
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MRKSQFLMAFLSAACLSAATASAQTLTVGLDADPPKLDPALSTALVDRQVMNQIFDKLLD
LDANLKVIPALATSWKVTNGGLTYTFKLKAGVKFTDGTALDAAAVKYGLDRNRTLEGSAR
KNEMSSIKEIKVVDPQTIQINLSQPYGPLLAVLTDRAGMIVSPTAAKKAGADFQNNPVGS
GPFTFVSRVRQDNITLNANKSYWGGAPKIDKLVYRPFTDGDVRYANLLSGAVQAITPIDP
KDISKLEQNPKFNVLNYPGIGFQGVWFNVTRAPFNNKNFRQAVAATIDREAIAKSIFYGT
VTPAAGPFPPGTPAASSAITVQKPDIALAKKKLGGKPLSFTLLTTPGSVTTQLAQVYQAM
FAQAGITAKIEQVEFGTLLDRADKQDYDALMLGWSGRPDPDGNIYDFFVTGGTNNQAGYS
NKTVDSLLAKARAQTAMSARAATYNVALSTILSDTPYTWVYFQRNLVASVKGMTGLKPIP
DGILRFKDVDLK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaatcccagttcctgatggcctttctgagcgccgcctgcctgagcgccgccacc
gcctcggcccagaccctgacggtggggctggacgccgatccgcccaagctggacccggcg
ctgtccaccgccctggtcgaccggcaggtgatgaaccagattttcgacaagctgctggat
ctggacgccaacctcaaggtgattccagcactggccacgtcgtggaaagtgaccaacggc
ggcctgacctacaccttcaagctcaaggcgggcgtgaaattcaccgacggcaccgcgctg
gacgccgccgccgtcaagtacgggctggaccgcaaccgcacgctggaaggcagcgcccgc
aagaacgagatgagcagcatcaaggaaatcaaggtggtcgacccacagaccattcagatc
aacctgtcgcagccgtacggaccgctgctggcggtgctcaccgaccgcgcgggcatgatc
gtctcgcccacggcggccaagaaggcgggggccgatttccagaacaatccggtgggcagc
ggcccctttaccttcgtcagccgcgtgcgtcaggacaacatcaccctgaacgccaacaag
agctactggggcggcgcgcccaagatcgacaagctggtctaccggccctttaccgacggc
gacgtgcgctacgccaacctgctgtcgggcgccgtgcaggccatcaccccgattgacccc
aaggacatcagcaagctggagcagaaccccaaattcaacgtgctgaactaccccggcatc
ggcttccagggcgtgtggttcaacgtgacccgcgcaccgttcaacaacaagaacttccgg
caggcggtggcggccaccatcgaccgcgaggcgattgccaagagcatcttctacggcacc
gtcaccccggccgccggtccctttccgcccggcacccccgccgcgtcctcggccatcacg
gtgcagaaacccgacattgccctggccaagaagaaactgggcggcaagccgctgtccttt
acgctgctgaccacgccgggcagcgtgaccacgcaactggcgcaggtgtatcaggccatg
ttcgcgcaggcgggcatcaccgccaagatcgagcaggtggagttcggcacgctgctggac
cgcgccgacaagcaggactacgacgccctgatgctgggctggagcggccgccccgatccc
gacggcaacatctacgacttcttcgtcacgggcggcaccaacaaccaggccggctacagc
aacaagacggtggacagcctgctggccaaggcccgcgcccagaccgccatgtctgcccgc
gcagccacctacaacgtcgccctgagcaccatcctcagcgacacgccctacacctgggtg
tacttccagcgcaatctggtggcgagcgtcaagggcatgaccggcctcaagcctattccc
gacggcatcctgcgctttaaagacgtggatctgaagtaa
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