Deinococcus sp. D7000: HLB42_18375
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Entry
HLB42_18375 CDS
T10857
Symbol
tnpB
Name
(GenBank) IS200/IS605 family element transposase accessory protein TnpB
KO
K07496
putative transposase
Organism
deid Deinococcus sp. D7000
Brite
KEGG Orthology (KO) [BR:
deid00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
HLB42_18375 (tnpB)
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Gene cluster
GFIT
Motif
Pfam:
Cas12f1-like_TNB
OrfB_IS605
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
QLG12860
LinkDB
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Position
p_1:315829..317175
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AA seq
448 aa
AA seq
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MKITLTAKLKLRHSPEQKIALDAVTLAYRDALNYTSGIAFAHNKLSAGMRLQTLVYEDLR
AKFGLPSQMACNAPRQVATSYKVQWTKLRQDQAARASGRSKRRYRGLDTPPKFVSRTLTY
NFGRDFSWKKDQQVSVQTLDGRIVMPFEGWNKHLGYIADGAKVGGARLYYQRSKKQYYLL
VSLEIDLPDPQPSDHKSVVGVDVGQRYHAVTTDTRNHSQFFSGKAINHKKEGFARVHQSL
QRKGTRSATRRLVAFSGRERRFIADRNHSLSAQILKTYPQAVIGLENLKDIRDRTEGRSH
PKASKTARRARRRRSQWSFAELQTFIAYKAGLVGSMAIPVDAHYTSQQCVKCGHTSRANR
PGNGLMFVCEVCRSTVHSDLLGARNVTLRTLAVRQDWTATGALSVRPGRPQSADPQAGSA
GRDVSDVEAKAERLQRYSELRWNPDTSP
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatcacgctcaccgccaagctcaagttgcggcacagcccggagcagaaaatcgct
ctggacgccgtcacgctggcctaccgggacgcgctgaactacacgtctggcattgctttt
gcccacaacaagctgtcggcgggaatgcggcttcagacgctggtctacgaagacctgcgc
gcgaagttcggcttgccgtctcagatggcctgcaacgccccacgtcaggtggcgaccagc
tacaaggtccagtggaccaagctgcgtcaggaccaggccgcacgggccagtgggcgcagc
aagcggcgctaccggggcctggatacgccgcccaaattcgtctcccgcacgctgacctac
aacttcggccgcgacttctcgtggaagaaagatcagcaggtcagtgttcagactctggac
ggccggatcgtgatgccttttgagggctggaacaagcatctcggatacatcgcagacggc
gccaaggtcggcggggccaggctgtattaccagcggtcaaaaaagcagtattacctgctg
gtcagcctggaaatcgacttgccggatcctcaaccatcagaccacaagagcgtggtgggt
gtggacgtgggtcagcggtatcacgccgtcaccaccgacacccgcaaccacagtcagttc
ttctccggcaaggctattaaccacaagaaagagggctttgcccgggtccatcagtcgttg
cagcgaaaaggcacccgttccgcgacccgccgtctagtggcgttctcgggacgggaaaga
cggttcatcgctgaccgcaaccattctctctcggctcagattttgaagacgtacccccag
gcggtgatcggcctggaaaaccttaaagacatccgcgaccgcaccgaagggcgaagccat
cccaaggccagcaagacggccaggcgggcccgtcgtcggcgcagtcagtggagctttgca
gaattgcagacctttatcgcatacaaggctggcctggtcggcagcatggccattccggtg
gacgcgcactacacgtcgcagcagtgcgtgaagtgcgggcataccagccgggccaaccgg
ccagggaatgggctgatgttcgtgtgtgaggtgtgcaggtctacggtgcattcggatctg
ctgggcgcgagaaatgtcaccctgagaacgttggcggttcggcaggactggaccgctacg
ggcgccttgtcagtgcgccctggtcgccctcaaagcgcggacccgcaagctggatccgct
gggcgagatgtgtcggatgttgaagccaaagctgagcgcctgcaacggtactcagagctg
cggtggaatccagacacaagcccgtga
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