Deinococcus sp. AJ005: DAAJ005_04275
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Entry
DAAJ005_04275 CDS
T06226
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dein
Deinococcus sp. AJ005
Brite
KEGG Orthology (KO) [BR:
dein00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dein03032
]
DAAJ005_04275
03400 DNA repair and recombination proteins [BR:
dein03400
]
DAAJ005_04275
Enzymes [BR:
dein01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DAAJ005_04275
DNA replication proteins [BR:
dein03032
]
Prokaryotic type
DNA Topoisomerases
DAAJ005_04275
DNA repair and recombination proteins [BR:
dein03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DAAJ005_04275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
AbiEi_4
Motif
Other DBs
NCBI-ProteinID:
QFP75759
UniProt:
A0A5J6YSI2
LinkDB
All DBs
Position
461354..462391
Genome browser
AA seq
345 aa
AA seq
DB search
MPGRTEILQEEYLRREGNDPKKFKYFWPDGTSYKDEDGISRIASLAVPPAYTDVFVSPDA
DAELQAFGRDAAGRLQYRYHPDFVQAGALKKWQRLTRFATALPTLREVTTSDLRLQGLPP
RKVMALMTRLLHVAHFRVGSDAYAKLHKTYGLSTLRQRHVTLEGNLITFNFRGKHGITQN
KATRNPTLAGNIGKLLELPGPWLFQTVGDDGRRRVHAPELNHYLKEVIGPFTAKDFRTWG
GTLLAAEYLAEAGVAGTERETRKVLVDCVKHVAEDLGNTPAVTRGSYICPVIFDRYLEGK
VLDDYEPRAGRLPAELEGLSRSEAALKRLLESEKVLKVGRGKRAA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgccgggccgcaccgaaatcttgcaggaggaatacctgcgccgcgagggcaacgatccg
aagaaattcaaatacttctggccggacggcacgagttacaaggacgaagacggcatctcc
cgtatcgccagtctggccgtgccacccgcgtacactgacgtctttgtctcgcccgatgcg
gatgccgagttacaggcatttggccgcgacgccgccggacgtctccagtaccgctatcac
cctgatttcgtgcaggccggggcactgaagaaatggcagcggctgacgcgctttgccact
gctttaccgacactgcgcgaggtcaccacctccgatctgcgtcttcagggactgccgccg
cgcaaggtgatggccctgatgacccggctgctgcacgtcgcgcatttccgggtgggcagt
gacgcctacgccaagctgcacaaaacgtatggcctcagcacgctgcgccagcggcatgtc
acgctggagggcaacctgatcaccttcaacttccggggcaagcacggcatcacgcagaac
aaggccacgcgcaaccccacgctggcgggcaacatcggcaagctgctggaactgcccggc
ccgtggctgtttcagacggtgggtgatgatggccgccgccgcgttcacgccccggaactg
aaccattatctgaaggaggtgatcggcccctttaccgccaaggatttccgcacctggggc
ggcacgctgctggccgccgaatatctggccgaggccggggtggcgggaaccgagcgcgag
acccgtaaggtgctggtggactgtgtcaagcatgtggccgaggacctgggcaacacgccc
gccgtgacgcgtggcagttatatctgccctgtcatttttgaccgctatctggagggcaag
gtgctggacgactacgaacctcgcgccggacgcctgcccgccgaactggagggcttgagc
cgcagcgaggcggccttaaagcggctgctggagagtgagaaggtgttgaaggtggggcgg
gggaaaagagcggcttag
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