Deinococcus sp. AJ005: DAAJ005_05305
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Entry
DAAJ005_05305 CDS
T06226
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dein
Deinococcus sp. AJ005
Brite
KEGG Orthology (KO) [BR:
dein00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dein03400
]
DAAJ005_05305
DNA repair and recombination proteins [BR:
dein03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DAAJ005_05305
Archaeal homologous recombinant proteins
DAAJ005_05305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
AAA_15
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QFP75933
LinkDB
All DBs
Position
complement(696656..699391)
Genome browser
AA seq
911 aa
AA seq
DB search
MKPIRLEVQGFTAFRQFTELDFGDLELFALVGPTGSGKSSLLDAMTFALYGYTERLGGSG
LDALISQGERGMSVGLTFETGGVTYRASRTKGRKQAENEVRFERKDADGRWANLSDGGVK
GVNERIQTVLGLTFKNFTRSVMLPQGEFARLLHGTGKERQAILGELTGLEHVAAMQRVAS
DKAKELKHRAGSLNSVLENEYADVTAEAVANLRAERERTDADAETLHDRREALQNSQARL
RETEKVWKAREDTSRRLVALDARAAGVQAGAVQAVQARRVAGVLPLLDAAERARIAAERE
ARALAGAQGAATQASRAAEAAQTNLDSAQEAEAGIPDLEARADKLREAEADAARLKRSGG
TPQTTHAQPLEWDEDAFLVARAGAEKAEKNRQERVKIEAERLGLNSALTRFKAEETAQAQ
EKAELERVKRDGQTAKADLEAAQKALEEARLTSGLASYRTHLHVGEDCPLCLQEVRELPD
APHADLGAAQDRVKVLSATLDERRTRFSDLRAALKARETWLADKEAENRNWQEATGQREA
DLRAAEALVTGDPQTEALRLLAGLAGRVRAAGTDPAGKRRQLLNDVIAIRKRVQEAGAAL
SRAAGDLAAANATLAAAQNASAGREADATEAQAALDSALSSLGMDAAQARAAALPENDIA
ALEEAARTQAAQRAQLAESLAELERQLGAAPFDPAELSQVGRDLTATDAALSATRERAGS
LAEQERAGRERLKRKAEIEAQAADAARSLDTWQTLTNSLKANEFQQFLLAEVEAQLLTRA
GLLLHEISDGRYRLALEKGEYMVQDLWNAGEARGVKTLSGGETFLASLSLAIALSDYLAG
NKILGALFLDEGFGTLDPQALEAVANALESLRTQGRMVGIVTHVESLSERLPSRLLVTKS
VAGSSVQRMDM
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccatccgtcttgaagtccagggcttcaccgccttccgccagttcaccgagctg
gactttggcgatctggaactgttcgcgctggtggggccgacgggcagcgggaaatccagc
ctgctggacgccatgacctttgcgttgtacggctacaccgagcgactgggcggctccggg
ctggacgcactgatctcgcagggcgaacgcggcatgagcgtgggcctgaccttcgagacc
ggcggcgtgacgtaccgtgcctcgcgcaccaagggccgcaagcaggccgagaacgaggtg
cgtttcgagcgcaaggatgcagacgggcgctgggccaatctcagcgacggcggcgtcaag
ggggtcaacgagcgcattcagacggtgctgggcctgaccttcaagaacttcacacgcagc
gtgatgctgccgcagggcgagtttgcccgcctgctgcacggcacaggcaaagagcggcag
gccattctgggcgagctgaccgggctggaacacgtcgccgccatgcagcgcgtcgcctct
gacaaggccaaagagctgaagcaccgcgcgggcagcctgaacagcgtgctggagaacgaa
tacgcggacgtgacagccgaggccgtggcaaatctgcgcgccgaacgcgaacgcaccgat
gccgatgccgagacgctgcatgaccgccgtgaagccttgcagaacagtcaggcccggttg
cgcgagaccgagaaggtctggaaggcacgcgaggacaccagtcgccgtctggtcgcgctg
gacgcccgcgccgccggggtgcaggccggggccgtgcaagcagtgcaggcccgccgggtg
gccggagtgctgccgctgctggacgccgccgaacgtgcccggattgccgccgaacgtgag
gcccgcgcgctggccggagcgcagggggccgccacccaggccagccgcgccgccgaggcc
gcccagaccaatctggactccgcgcaggaggccgaggcaggtatccccgatctggaagcc
cgcgccgacaaactgcgtgaggccgaggccgacgccgcccgcctcaagcgttccggcggc
acgccccagaccacccacgcacagccgctggagtgggatgaggacgcctttctggtggcc
cgcgccggggccgaaaaggccgagaagaaccggcaggagcgcgtcaagatcgaggccgag
cgactgggcctgaattcagcgctgacccgcttcaaggccgaggaaacggcacaagcgcag
gaaaaggcagagctggaacgcgtcaaacgcgacggtcagacggccaaggccgatctggaa
gccgcgcaaaaggcgctggaggaagcccgcctcacctccgggctggcctcctaccgcacg
cacctgcatgtgggcgaggactgcccgctgtgtttgcaggaagtgcgcgaactgcccgac
gccccacatgccgatctgggcgcggcgcaggaccgtgtgaaggtattgagcgccacgctg
gatgagcgccgcacccgcttcagcgatctgcgcgccgccctgaaggcccgcgagacatgg
ctggccgacaaggaggccgagaaccgcaactggcaggaggccaccggacagcgcgaggcc
gatctgcgcgcggctgaggcgctggtcacgggcgatcctcagacggaagccctgcgcctg
ctggctggactggcgggacgggtgcgcgcggcaggcacggaccccgccgggaaacgtcgt
caactcctcaacgacgtgatcgctatccgcaagcgtgtacaggaggcaggggcggccctg
tcccgtgcagcgggcgatctggcggcggccaatgccacgctggcggcggcgcaaaatgcc
tcggcgggccgggaggcggacgccacggaggcccaggcagcactggattctgccctttcc
agtctgggcatggacgctgcacaggccagagccgccgcattacctgaaaacgacatcgcc
gcgctggaggaggctgcccgcacccaggctgcccagcgggcgcaactggccgagagcttg
gccgaactggaacgccagttgggagctgcccccttcgatccggcagagctgtcacaggtg
ggccgtgacctgaccgccaccgacgccgccctgtctgccacccgcgagcgcgccgggagt
ctggccgagcaggaacgggccggacgcgaacgcctgaagcgcaaggccgagatcgaggcc
caggccgccgacgccgcccgcagcctggacacctggcagacgctgaccaactcgctgaag
gccaatgaattccagcaattcctgctggccgaagtcgaggcccaactgctgacccgcgcg
ggcctgctgctgcacgagatcagcgatgggcgctaccgtctggccctggaaaaaggcgag
tacatggtgcaggacctgtggaatgcgggcgaggcacgcggcgtcaagaccctctccggg
ggcgagacattcctggcctccctgtcgctggcgattgccctgagcgactatctggccggg
aacaagattctgggcgcactgtttctggacgagggcttcggcacgctggacccacaggcg
ctggaagcggtggcaaacgccctggaaagcctccgcacccagggccgcatggtgggcatc
gtcacccatgtcgaaagcctgtccgagcggttgcccagccgcctgctggtgaccaagagc
gtggcgggaagcagcgtgcagcggatggatatgtag
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