Deinococcus sp. AJ005: DAAJ005_10170
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Entry
DAAJ005_10170 CDS
T06226
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dein
Deinococcus sp. AJ005
Pathway
dein03420
Nucleotide excision repair
dein03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dein00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DAAJ005_10170
03430 Mismatch repair
DAAJ005_10170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dein03400
]
DAAJ005_10170
Enzymes [BR:
dein01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DAAJ005_10170
DNA repair and recombination proteins [BR:
dein03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DAAJ005_10170
MMR (mismatch excision repair)
Other MMR factors
DAAJ005_10170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Costars
FACT-Spt16_Nlob
DUF3553
ResIII
DUF4566
Motif
Other DBs
NCBI-ProteinID:
QFP78331
UniProt:
A0A5J6Z1N2
LinkDB
All DBs
Position
1737476..1739713
Genome browser
AA seq
745 aa
AA seq
DB search
MPDQTDPNHRDLLSQLNETQAQAADHFEGPALVIAGAGSGKTRTLIYRIARLITHYGVDP
GEILAVTFTNKAAAEMRERAAHLMPGANKLWMSTFHSAGVRILRQYGEHIGLKRGFVIYD
DDDQLDIFKEVMGSIPGIGPDTSPRVLRGIVDRAKSNLLTPADLARSGDPYISGLPREAA
AEAYRIYESRKKGQNAIDFGDLITETVRLFHEVPGVLNAVQSRAKFIHVDEYQDTNKSQY
ELTRLLASRDKNLLVVGDPDQSIYKFRGADIQNILDFQKDYSGAKVYVLEHNYRSSASVL
NLANKLIENNTERMDKTLRAVKEDGHAVMFHRATDHRAEGDFVAEWLTRLHNTEGRKFAD
MAILYRTNAQSRVMEESLRRVQIPAKIVGGVGFYDRREIRDILAYARLSLNPSDDVALRR
IIGRPRRGIGDTALARLMDWARINNASLLTACARAEEDQILDRGAQKPVEFAKLMAAMSD
AAENYEPAAFLRFVIETSGYLDLLRQEGQEGQIRMENLDELINAAEEWSGDNDGTIGDFL
DEAALLSSVDDMRSKKENRDVPEDAVTLMTLHNAKGLEFPVVFIVGTEEGLLPSKGALTE
AGGIEEERRLFYVGITRAMERLFLTAAQNRMQYGKTNAAEDSRFLEEIEGGFDTVDPYGQ
VVEYRAKTWKQYRPTVPVTPSSVKNTSPMTAGMAYRGGEKVRHPKFGEGQVLAVAGMGDK
QEVTVHFPTAGTKKLLVKFANLSAV
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaccagactgaccccaaccacagagacctgctgagccagctcaacgagacccag
gcgcaggccgccgaccattttgaaggtccagccctggtcattgccggggcaggcagcggc
aagacgcgcacgctgatctaccggattgcccgcctgatcacccattacggcgtggacccc
ggcgagattctggccgtgacctttaccaacaaggccgccgccgagatgcgtgaacgggcc
gcccacctgatgccaggagcaaacaaactgtggatgagtacctttcacagcgcaggcgtg
cggattctgcgtcagtacggcgaacatatcggcttgaaacgcggcttcgtgatctatgac
gacgacgatcaactggacatcttcaaggaagtgatgggcagcattcccggcatcggcccg
gacaccagcccacgcgtgctgcgcggtatcgtggaccgggccaagagcaacctgctgacg
cccgccgatctggcgagaagcggcgatccatacatcagcggtctgccacgcgaagctgct
gccgaggcataccgcatctacgagagccgcaagaagggccagaatgccatcgatttcgga
gacctgattaccgagaccgtgcggctgtttcatgaagtgcccggcgtgttgaatgctgtt
cagagccgtgccaaatttattcatgtggacgagtatcaggatacgaacaaatcgcaatat
gagttgacgcgtttactggcaagcagggataaaaacttgcttgtcgtcggcgatccagac
cagtcgatctataaattcagaggcgcagacattcaaaatatcctggatttccagaaagat
tattccggcgcaaaagtctatgttctggaacacaactaccgctccagcgccagcgtgctg
aatctggccaataaactgatcgagaacaacactgaacgcatggacaagaccctgcgggcg
gtcaaggaagacggccacgcggtcatgttccaccgcgccaccgatcaccgcgccgagggc
gatttcgtggccgaatggctgacccgtctgcacaacaccgagggccgtaaattcgccgat
atggcgatcctgtaccgcaccaacgcccagtcgcgcgtgatggaagaatcgctgcggcgc
gtgcagattccggcgaagatcgtagggggcgtgggcttctatgaccgccgcgagatccgc
gacattctggcctatgcgcgcctgtcgctgaatccatcggacgacgtggccctgcgccgc
atcatcgggcggccccgacgcggaatcggcgatacggcgctggcacggttgatggactgg
gcacgcatcaacaacgcctccctcctgaccgcctgcgcgcgggccgaggaagaccagatt
ctggaccggggggcgcagaaacccgtggaattcgccaagctgatggctgccatgagcgac
gctgccgagaactacgaacccgccgccttccttcgcttcgtgatcgagaccagcggttac
ctcgatctgctgcgccaggaaggtcaggaaggccagattcggatggagaacctggacgaa
ttgatcaacgccgccgaggaatggtccggcgacaacgacggcaccatcggcgattttctg
gacgaggccgccctgctgtccagcgtggacgacatgcgctctaaaaaggaaaacagagac
gtgccggaagacgccgtgaccctgatgaccctgcacaacgccaaggggctggaattcccg
gtggtgttcatcgtgggcactgaggaaggactgctgcccagtaagggggcgctgaccgag
gccgggggcatcgaggaggaacggcggctgttctacgtgggcatcacccgcgcaatggaa
cgcctgttcctgaccgccgcgcagaaccgcatgcagtacggcaagaccaacgccgccgag
gacagccgctttctggaggaaatcgagggcggcttcgacaccgtggacccctacggccag
gtggtggaataccgtgccaagacatggaaacagtaccggcccaccgtgcccgtcaccccc
agctcggtcaagaataccagcccgatgacggcgggcatggcgtaccggggcggcgagaag
gtcaggcatcccaagttcggtgaggggcaggtgctggcggtggctggaatgggcgacaag
caggaagtgacggtgcatttcccgacggcggggacgaagaaactgctggtgaagttcgcc
aacctcagcgcggtgtga
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