KEGG   Deinococcus sp. AJ005: DAAJ005_10440
Entry
DAAJ005_10440     CDS       T06226                                 
Name
(GenBank) helix-turn-helix domain-containing protein
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
dein  Deinococcus sp. AJ005
Brite
KEGG Orthology (KO) [BR:dein00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dein03000]
    DAAJ005_10440
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dein02048]
    DAAJ005_10440
Transcription factors [BR:dein03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    DAAJ005_10440
Prokaryotic defense system [BR:dein02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    DAAJ005_10440
SSDB
Motif
Pfam: HTH_3 HTH_26 HTH_31 HTH_37 HTH_24 Sigma70_r4 HNF-1_N HTH_19 HTH_IclR Xre-like-HTH HTH_5 MarR_2 HTH_Crp_2 HTH_10 HTH_28 HTH_11 YdaS_toxin HTH_23 DNA_pol3_delta_C Cro DUF7343 HTH_AsnC-type MarR P22_Cro Phage_CI_repr Sigma54_DBD HTH_6 BetR Phage_CII HTH_60 Mga
Other DBs
NCBI-ProteinID: QFP76827
UniProt: A0A5J6YXH3
LinkDB
Position
1794835..1795293
AA seq 152 aa
MTTGGPDMTTLPNFNAFVQSWQQIHSYAPGLFVEITDDETLKQATDALKALDAEMSASGI
HPHPLDDLANTVMNRIVAYEAVHYPIPDIDAPDILKVFMEERHLTQQQLAKAVGISQSTI
SQLLGRRRAFTLEHLHKLAGYFGVKVSLFLPD
NT seq 459 nt   +upstreamnt  +downstreamnt
atgaccactggaggccctgatatgaccaccttgcccaacttcaacgcctttgttcagtcg
tggcagcaaatccatagctatgcacctggattatttgttgaaatcactgacgatgaaacc
ctcaaacaggcaacggacgcactcaaagccctagacgccgagatgagcgccagcggaatt
catccgcacccgcttgatgatctggcaaacaccgtcatgaaccgcatcgtcgcctatgaa
gccgtccactaccccatccccgacatagacgcccctgacatcctcaaagtgtttatggaa
gaacgccacctgacccagcagcaactcgctaaagcggtgggcatcagccaaagcaccatc
agccaactgctggggcgcaggcgggccttcacgctggagcatctgcacaagctggccggg
tactttggggtgaaggtatcgctgtttttgccggactga

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