Deinococcus sp. AJ005: DAAJ005_10795
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Entry
DAAJ005_10795 CDS
T06226
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dein
Deinococcus sp. AJ005
Pathway
dein03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dein00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DAAJ005_10795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dein03021
]
DAAJ005_10795
03400 DNA repair and recombination proteins [BR:
dein03400
]
DAAJ005_10795
Enzymes [BR:
dein01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DAAJ005_10795
Transcription machinery [BR:
dein03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DAAJ005_10795
DNA repair and recombination proteins [BR:
dein03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DAAJ005_10795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
RNA_pol_L_2
IMS_HHH
DUF5805
Motif
Other DBs
NCBI-ProteinID:
QFP76885
LinkDB
All DBs
Position
complement(1861660..1862676)
Genome browser
AA seq
338 aa
AA seq
DB search
MDQKRPQLKARVDGDYGEFVLEPLTRGYGVTIGNPIRRILMSSIPGTAVTSVYIEDVLHE
FSTIPGVKEDVIQMILNLKELVVKFHAPGPKTLTLRAQGEGVVKASAFEVPSDAEIVNPD
LVIATLAEDGKLVMEVRVEEGEGYVPAEKHATKDRINSIPVDAVFSPVRRVAYHVENTRV
GQQTDLDRLILRVWTDGSTGPQDTLDKAVEILREELNVFGNVENLPALTPEFTQQPVYTP
SAPVMPQTGVYDLPPTSPTTLNLNPGDYPAEMDSPRVTLEGLGLTTRVLHSLKEEGIDSV
DALCALSDRDLKKVPGIGERSLDEIKQQLAQFGLALRD
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaagcgccctcaactcaaagcccgcgtggacggcgattacggcgaattcgtc
ctggaaccgctcacgcgcggttacggcgtcaccatcgggaaccccatccggcgcatcctg
atgtcctcgatccccggcacggctgtcaccagcgtgtatatcgaagacgtgctgcacgaa
ttttccaccattcccggagtgaaagaggacgtcattcagatgatcctcaacctcaaggaa
ctggtcgtgaaattccacgctcccggtcccaaaaccctgaccctgcgcgcgcagggcgag
ggtgtcgtcaaggccagcgccttcgaggtacccagcgacgccgagatcgtcaaccccgat
ctggtgatcgccactttggctgaagacggcaagctggtcatggaagtgcgcgtggaagaa
ggcgagggctatgttcccgctgaaaagcacgccaccaaggaccgcatcaactccattccg
gtggacgcggtgttctccccggtgcgccgggtggcctaccacgtcgagaacacccgcgtg
ggacagcagaccgacttggaccgcttgatcctgcgcgtctggaccgatggcagcactggc
ccgcaggacaccctggacaaggcggtggagattctgcgtgaagagctgaacgtgttcggc
aacgtggaaaacctgcctgccctgaccccggagttcacccagcagccggtgtacaccccc
agcgcccccgtcatgccacagaccggcgtgtacgatctgccccccaccagccccacgacg
ttgaatctgaaccccggcgattaccctgccgagatggattcgccgcgtgtcacgctggaa
gggctgggtctgaccacccgcgtgctgcattccctcaaggaagaaggcatcgacagcgtg
gacgcgttgtgcgctctgagtgaccgtgacctgaagaaggttcccggcatcggcgagcgc
agcctggatgagatcaagcagcaattggcccagtttgggcttgctctgcgcgactaa
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