Deinococcus sp. AJ005: DAAJ005_11275
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Entry
DAAJ005_11275 CDS
T06226
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
dein
Deinococcus sp. AJ005
Brite
KEGG Orthology (KO) [BR:
dein00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dein03016
]
DAAJ005_11275 (truD)
Enzymes [BR:
dein01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
DAAJ005_11275 (truD)
Transfer RNA biogenesis [BR:
dein03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DAAJ005_11275 (truD)
Prokaryotic type
DAAJ005_11275 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QFP78357
UniProt:
A0A5J6Z236
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All DBs
Position
complement(1945062..1946126)
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AA seq
354 aa
AA seq
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MRALTESAGTGGTLRAEAQDFRVEEVGAYPLSGEGDHLYLHVEKTGHTTAHVLRELSAQV
GLRDRDIGVAGLKDRHAVTTQWLSVPAKYERRLGEFGLDGVRILDITRHGNKLGMGHLRG
NRFVVRVRDAAGGAAEAEAVLNLLVAGGVPNYFGPQRFGLGGLNAEEGLRVLRGESRLRD
PRVRRFLISSVQSAVFNASLSLRLERGLFASLLAGDMAKKHDTGGVFLVEDAAAESPRAE
RGEVSATGTLFGKKTKPLTLDAGALEAEALALFDLTPGVFASRRGDRRLTRVFPEEASVI
PQDDGYTLSFTLPKGSFATSVLREVMKTEVDSAGPDDAEPDGSESDDGATGGQE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
ctgcgggcgctgacggaatcggcaggaacgggcggaacgctgcgcgctgaagcccaggat
ttccgggtagaggaagtgggtgcgtatccgctttcgggtgagggcgatcacctgtatttg
catgtcgagaagaccgggcacaccaccgcccatgtcctgcgtgaattgagtgcccaagtg
ggcctgcgtgaccgcgacattggcgtggcgggcctgaaagaccggcatgcggtgaccacc
cagtggctcagcgttccggccaagtacgagcgccgtctgggcgagttcggactggacggc
gtgcggattctggatatcacccgccacggcaacaagctgggcatgggccacttgcgcggc
aaccgcttcgtggtgcgcgtgcgggacgcggcgggcggcgcagccgaggctgaggcggtc
ctgaatcttctggtcgcagggggcgtgcccaattactttggtccgcaacgcttcggcctg
ggcggcttgaatgccgaggagggattgcgtgtgctgcgcggcgaatcgcgcctgcgggac
ccgcgcgtgcgccgcttcctgatctccagcgtgcagagtgcggtgttcaacgcttctctc
agtctgcgcctggaacgcggcctgttcgcctcgctgctggcaggcgatatggccaagaag
cacgacacgggcggggtctttctggtcgaagacgccgctgccgagtcgccccgcgccgaa
cgcggcgaggtcagcgccactggcacgctgttcggcaagaagaccaaaccgctgaccctg
gacgccggggcgctggaggccgaggcgctggccctgtttgatctgacgccgggtgtgttc
gcctcccggcgtggagaccgccgattgacccgcgtgttccccgaagaggccagtgttatt
ccgcaggacgacggctacacgctgtccttcaccctgcctaagggcagtttcgccaccagc
gttctgcgcgaggtgatgaagactgaggtggacagcgccgggccggacgacgcggaacct
gatggctctgaatctgatgacggtgcaacaggcggtcaggagtga
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