Deinococcus sp. AJ005: DAAJ005_15160
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Entry
DAAJ005_15160 CDS
T06226
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
dein
Deinococcus sp. AJ005
Pathway
dein03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dein00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DAAJ005_15160 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dein03400
]
DAAJ005_15160 (ruvB)
Enzymes [BR:
dein01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DAAJ005_15160 (ruvB)
DNA repair and recombination proteins [BR:
dein03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DAAJ005_15160 (ruvB)
RecFOR pathway proteins
DAAJ005_15160 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
RuvB_C
AAA_lid_4
AAA
AAA_5
TIP49
AAA_22
AAA_16
AAA_14
Mg_chelatase
nSTAND3
NTPase_1
TsaE
bpMoxR
AAA_33
AAA_18
AAA_3
AAA_17
ABC_tran
RNA_helicase
Rad17
AAA_28
Sigma54_activ_2
AAA_25
DUF1400
AAA_24
Motif
Other DBs
NCBI-ProteinID:
QFP77639
UniProt:
A0A5J6YXU4
LinkDB
All DBs
Position
2735831..2736826
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AA seq
331 aa
AA seq
DB search
MTEPFDAALRPKSLTEYVGQEKLKDKLGVYLQAARNRREALDHTLLFGPPGLGKTTLAHI
IAAELGVNIRVTSGPAIEKPGDLAAILTNSLEEGDVLFIDEIHRLGRVAEEHLYPAMEDF
KLDIVLGQGPAARTIELPLPRFTLVGATTRPGLISAPMRSRFGIIEHLEYYTPEEIATNL
LRDARLLGFGLVEEAALEIGGRSRGTMRIAKRLLRRVRDYAEVAGESTIELERAYSALDK
LGLDTAGLDDRDKKYLETLIHRFAGGPVGVDTLATAISEDALTLEDVYEPYLIQLGFIKR
TPRGRVATAHAYDHLGLPVGGADGDLGLYTN
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaccgttcgacgccgccctgcgtcccaagtcgctgaccgaatacgtgggccag
gagaagctgaaggacaagctgggcgtgtacctgcaagctgcccgcaaccgcagggaggcg
ctggaccacacgctactgttcgggccgccggggctgggcaagaccacgctggcgcacatc
atcgccgccgagctgggcgtgaatatccgcgtgacctccggcccggcgattgagaaacca
ggggatctggcggccatcctgaccaacagcttggaggaaggcgacgtgctgttcatcgac
gagattcaccgtctgggacgggtggcagaagaacacctgtatccggcgatggaggatttc
aagctggacatcgtgctggggcaggggccggcggcgcgcaccatcgagctgccgctgccg
cgctttacgctggtgggcgcaaccacgcggcccggcctgatcagcgcgccgatgcgctcg
cgctttgggatcatcgagcatctggagtattacacccccgaggaaatcgccaccaaccta
ctgcgtgacgcccggctgctggggttcgggttggttgaagaagccgccctggaaataggg
gggcgctcgcgcgggaccatgcgaatcgccaagcggctgctgcgccgggtgcgcgattac
gccgaggtggccggggaaagcaccattgagctggaacgggcctacagcgccctggacaag
ctggggctggacacggcggggctggatgaccgcgacaagaagtacctggaaacgctgatc
caccgtttcgcgggtgggccggtgggcgtggacaccctcgccactgccatttccgaggac
gcgctgaccctggaagacgtgtacgagccgtacctgatccaactgggttttatcaagcgc
accccacgcggacgggtggcgacggcccacgcctatgaccatctggggttgcccgtgggc
ggggcggatggggatttggggctttatacgaattag
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