Deinococcus sp. AJ005: DAAJ005_15365
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Entry
DAAJ005_15365 CDS
T06226
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dein
Deinococcus sp. AJ005
Pathway
dein03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dein00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DAAJ005_15365 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dein03019
]
DAAJ005_15365 (recQ)
03400 DNA repair and recombination proteins [BR:
dein03400
]
DAAJ005_15365 (recQ)
Enzymes [BR:
dein01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DAAJ005_15365 (recQ)
Messenger RNA biogenesis [BR:
dein03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DAAJ005_15365 (recQ)
DNA repair and recombination proteins [BR:
dein03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DAAJ005_15365 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
DEAD
RecQ_Zn_bind
Helicase_C
HHH
HHH_5
DUF3613
zf-CXXC
ResIII
Motif
Other DBs
NCBI-ProteinID:
QFP77671
LinkDB
All DBs
Position
complement(2786247..2788478)
Genome browser
AA seq
743 aa
AA seq
DB search
MSLVQPHTAQSPAETDARALEVLSRVWGYGAFRDVQADIVRTVVEGNNALVLMPTGGGKS
LCYQVPSLLRPGVGIVVSPLIALMKDQVDALRQFGVRAAFLNSSLDLQSVREVEAALMAG
ELDMLYVAPERLLLPRTLDLLERASVALFAIDEAHCVSQWGHDFRPEYGQLGVLPRRFPD
IPRVALTATADDRTRADILNVLELNSAAQFISSFDRPNIQYRVANKEGPKTQLLDFIHAE
HRGDAGIVYCLSRKSVEQTAQWLATQGVDAVPYHAGLSPRERNHAQERFLNDEGVVVVAT
VAFGMGIDKPNVRFVAHLDLPKSMEGYYQETGRAGRDGLPSTAWMVYGLADVVNVKRMLS
QSDAPEDVKRVEAAKLDALLTYCEAATCRRQLLLAYFGEERNEPCGNCDICLNPPKVRDA
TREAQMALSAAIRTGNRFGAAHLTDILLGQPTEKVVAMGHHLLPTFGVGKGHDEKMWRGL
IRQMVSLGHLAAGEHYGLSATGKSRPLLKGETQLMLREDSLVPHEKSRKRDRDASRGNRA
PVDSQDAPLFEALRAWRLQLARQKAVPPYAIFSDATLKAICELRPGSAATLGTVSGVGQR
KLADYGEGVLDIVREHSGSERARPASPAERGIRENSAVLGLLRGKEERTPPQPLFSAPVR
AEQTPPVSVNPDVAEVLRELRRELTRETGHSAFVIFPNAALEALAAACPRTVEELQGLPG
MGPKRIENYGERIVEVVLTVLNG
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttgtccagccgcacactgcccaatctcctgccgaaaccgacgcacgcgccctg
gaagtcctgagccgggtctggggttatggggcatttcgggacgtgcaggctgacattgtg
cggacggtggtagagggcaacaatgcgctggtgctgatgcccacgggcggcggcaagagc
ctgtgctatcaggtgcccagtttgctgcgccccggcgttggcatcgtggtgtcgcccctt
atcgcgctgatgaaagatcaggtggacgcgctgaggcaatttggcgtgcgggccgctttt
ctgaattccagcctggatttgcaaagtgtgcgcgaggtggaagctgccctgatggccggg
gaactggacatgctgtacgtggcccccgaacgcctgttgctgccgcgcacgttggacctg
ctggaacgcgcctcggtggccctgttcgccatcgacgaggctcactgtgtctcgcagtgg
gggcatgatttcaggccggaatacgggcaacttggcgtgctgccccggcgttttcccgac
atcccccgcgtggccctgaccgccaccgccgatgaccgcacgcgcgccgacatcctgaac
gtgctggaactgaacagcgcggcacagttcatctccagctttgaccgcccgaatatccag
taccgggtggcgaacaaggagggccccaagacccagttgctggattttatccacgccgaa
caccggggagacgcgggcatcgtgtactgcctgtcgcgcaaatcggtggaacagaccgcg
cagtggctggcgacgcagggggtggacgccgtgccgtatcacgcgggcctctcgccgcgt
gagcgcaaccacgcccaggaacgctttctgaacgacgagggtgtggtggtggtggccacg
gtggcctttggcatgggcattgacaagcccaacgtacgtttcgtggcgcacctggacctg
cccaagagcatggagggctactaccaggaaacgggccgcgccgggcgcgacggcctgccc
agcaccgcctggatggtctacgggctggccgacgtggtgaacgtcaagcggatgctctcg
cagagtgacgcgccggaggacgtaaagcgcgtggaggctgccaaactggacgccctgctc
acctactgcgaggccgcgacctgccgccgccagttgttgctggcctactttggagaggag
agaaacgaaccctgcggcaactgcgacatctgcctgaacccaccgaaagtgcgcgacgcc
acccgcgaggcgcagatggccctgagcgcggctattcgcacgggcaaccgttttggcgcg
gctcacctgaccgacattctgctgggccagcccaccgagaaagtcgtggcgatgggccac
catctgctgcccaccttcggcgtcggcaagggccacgacgagaagatgtggcgcgggctg
atccgtcaaatggtcagtctgggtcacctcgcagcgggcgaacactatggcctgagcgcc
actggcaaatctcgcccgctgttgaagggcgagacacaactgatgttgcgtgaggacagt
ctcgttccccacgaaaagtctcgcaagcgggaccgggacgcttcccgtggcaaccgcgcc
ccggtggattcacaggacgcgccgctgtttgaagcattgcgggcctggaggcttcagctt
gcccggcagaaagctgtgccgccctacgccattttcagcgacgccaccctcaaggccatc
tgcgagttgcgccccggtagcgcggccacgctgggaacggtcagcggtgtgggccagcgc
aaactggctgattatggcgagggcgtgctagacatcgtgcgcgaacattcggggagtgag
cgggcgcggcctgcttcacccgccgagcgtgggatacgggaaaacagcgccgtgctgggg
ctgctgcgtggtaaggaagaaagaacgccaccccagcccctcttctcagccccagtcaga
gcagagcaaaccccgcccgtctccgtcaatccagatgttgccgaagtcctgcgcgaactg
cgccgcgagttgactcgcgaaactggacacagcgccttcgtgatcttcccgaacgccgcg
ctggaagccctggctgctgcctgcccacgcacggtggaagaacttcagggcctgcccggt
atgggaccgaagcgcattgagaattacggcgaacgcatcgtggaggtggttttgacggtg
ctgaacgggtga
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