Deinococcus sp. AJ005: DAAJ005_17200
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Entry
DAAJ005_17200 CDS
T06226
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
dein
Deinococcus sp. AJ005
Brite
KEGG Orthology (KO) [BR:
dein00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dein03016
]
DAAJ005_17200
Enzymes [BR:
dein01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
DAAJ005_17200
Transfer RNA biogenesis [BR:
dein03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DAAJ005_17200
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Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
QFP77988
UniProt:
A0A5J6Z2T1
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Position
3158204..3159586
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AA seq
460 aa
AA seq
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MTLPELTSAQRTDVELLARGKAEKSRTLREMNLPETPESAHTLLLRLGIWNEAKTPYADR
LGATLTHLSLDVPDFADENRLDLTHLPAYAIDDEGSRDPDDAIGIEALEGGLTRLWVHVA
DVAALVPPESELDLEARARGATLYLPDQTIGMLPDALIEKTGLGLHDTMPALSISLDLDA
DGNADAVDVALTTVRITRLTYMGAQAKLEAGEEPFVTLARLAHASKELRDSEGALSIELP
EVKIKADENGASVTPLPKPEMRFVVQECMTLAGWAAAIYADDHDIPLPFATQADPSREVR
GEGLGVQWARRKTLARTRFQPSPGPHSGMGLDLYAQATSPMRRYLDLVVHQQLRAALTGG
EPLDGKVVAAHIAQATLNADATRQAERLSRKHHTLRFAAAQPEREWEAVVVDRRGPQATL
LIPELAYDLPFSTPAPVGTALRIRLVDVNLPALSMRARLV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgacattgcccgaactcacctccgcccagcgcaccgatgtggaactgctggcgcgcggc
aaggcagaaaagagccgcaccctgcgcgagatgaacctgcccgagacgccggaatccgcc
cacacgctgctgttgcgcctgggcatctggaacgaggcgaagacgccctacgcagaccgt
ctgggcgcaacgctgacccacctttcgctagacgtgccggattttgccgacgagaaccgg
ctggacctgacccatttgcccgcctacgcgattgacgacgagggcagccgtgacccggac
gacgcgataggcattgaggcgttggagggcggtctgacgcgcctgtgggtgcatgtggcg
gacgtggccgcgctggtgccaccggaaagcgagctggacctggaggcccgcgcacgcggc
gcgacgctgtatctgccagaccagaccattggcatgttgcccgacgctctgatcgagaag
accgggctgggcctgcacgacaccatgcccgcgctgtcgatctcgctggacctggacgcc
gacggcaacgccgacgccgtggatgtggccctgaccaccgtgcggatcacgcggctgacg
tacatgggcgcgcaggcgaagctggaggcgggcgaggaacccttcgtgacgctggcccgg
ctagcccatgccagcaaggaactgcgcgattccgagggcgcactatccatcgaactgccc
gaagtgaagattaaagccgacgagaacggcgcgtccgtgacgccgctgcccaagccggaa
atgcgcttcgtggtgcaggaatgcatgacgctggccggctgggccgctgccatttacgcc
gatgaccacgacattcccctgccgtttgccacccaggccgatcccagccgtgaggtacgc
ggcgaggggctgggcgtgcagtgggcacggcgcaaaacgctggcccgcacgcgctttcag
ccgtcgccggggccgcattccggcatggggctggacctgtacgcgcaggccaccagcccg
atgcggcgctacctggatctggtggtgcaccagcaactgcgcgccgcgctgacggggggg
gaaccgctggacggcaaggtggtggccgcgcacatcgcccaggccaccctgaatgccgac
gccacccggcaggccgaacgcctgagccgcaagcaccacaccctgcgcttcgccgccgcc
cagccggagcgcgagtgggaggcggtggtggtggaccgccggggaccgcaggccaccctg
ctgattcccgaactggcctacgatctgcccttcagcacccccgcgcccgtgggaacggcg
ttgcgaatcaggctggtggacgtgaacctgcccgccctgagcatgcgggcgcggctggtc
tga
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