Pseudodesulfovibrio indicus: AWY79_00430
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Entry
AWY79_00430 CDS
T04404
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dej
Pseudodesulfovibrio indicus
Brite
KEGG Orthology (KO) [BR:
dej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dej03032
]
AWY79_00430
03400 DNA repair and recombination proteins [BR:
dej03400
]
AWY79_00430
Enzymes [BR:
dej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AWY79_00430
DNA replication proteins [BR:
dej03032
]
Prokaryotic type
DNA Topoisomerases
AWY79_00430
DNA repair and recombination proteins [BR:
dej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AWY79_00430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AMK09677
UniProt:
A0A140D910
LinkDB
All DBs
Position
complement(75121..77532)
Genome browser
AA seq
803 aa
AA seq
DB search
MPKDLIIVESPAKVKTISKFLGKDYIVDASVGHVRDLPTRDLGVDEENDFAPHYEVIQGK
EDVVKRLRAAAKKADTVYLAPDPDREGEAIAWHVAELLKPVNDKIRRIQFNEITARAVKE
ALEHAQDLNENLFDSQQARRILDRLVGYKISPILWKNVKRGISAGRVQSVALKILVEREK
ERRAFKADEYWPFKVLLEGGNPPPFWMDLHKLEDKAVKPGANHVSTASEAETLQQELENG
AFTVDSVQEKQRKREPLPPYITSTLQQDANRRMGYSAKRTMSIAQRLYEGVELGTRGTTA
LITYMRTDSVRIAKEAQDAAKELILDRFGADYYPPKTRNFKTKGGAQDAHEAIRPVDVTI
TPESVKSFLPGEQYKLYRLVWQRFVASQMAAATFWDTTVLVSAPRTVWRAKGERLLFAGF
LAAMDKAKSEDEAELPKLSEGEVLKLNELKKEQKFTQPPPRYSEASLVKTLEELGIGRPS
TYAAIISTLLEREYARQEEKRFVPTELGFTVSDQLSEHFQALMDVGFTAQMETMLDDVAD
GKKDWKELLKNFGGDFYPTLEKARTEMGRSQQVTDIKCENCGKPMAVKFGKTGEFLGCTG
FPACRTIKNFTRDEEGNIEVVDREKPEDTGVTCEKCGRPMAIKQSRRGEFLGCTGYPDCK
SIVNFTRDADGNIQVVESEKPEVVGTCPDCGGELLLKKARTGSRFIACSNYPDCTYAAPF
STGVPCPNEGCDGELVEKSSRRGKLFYSCSAYPKCDYAVWNWPIKEECPKCGHPILTRKA
TKDKGEHIACPKKGCGYTRPIED
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaagacctgatcatcgtcgagtcccccgccaaggtgaagaccatctccaaattc
ctgggcaaggattacatcgtggacgcctccgtgggtcacgtgcgcgacctgcccacccgc
gacctgggcgtggacgaggagaacgacttcgccccccactacgaggtcatccagggcaag
gaggacgtggtcaagcggctgcgcgccgccgccaagaaggcggacaccgtctacctggcc
cccgaccccgaccgcgagggtgaggccatcgcctggcacgttgccgagctgctcaagccg
gtcaacgacaagatcaggcgcatccagttcaacgaaatcacggcccgcgcggtcaaggag
gccctggagcacgcccaggacctgaacgagaacctgttcgactcccagcaggcccggcgc
atcctggaccggctggtgggctacaagatctccccgatcctgtggaagaacgtcaagcgc
ggcatctccgccgggcgcgtccagtccgtggccctcaagatcctggtcgagcgcgaaaag
gaacgccgcgccttcaaggccgacgagtactggccgttcaaggtcctgctcgaaggcggg
aacccgccgccgttctggatggacctgcacaagctggaggacaaggccgtcaagccgggc
gccaaccacgtctccaccgcgagcgaggccgagaccctgcagcaggagctggaaaacggc
gccttcaccgtggactccgtgcaggagaagcagcgcaagcgcgaacccctgccgccctac
atcacctccaccctgcagcaggacgccaaccggcgcatgggctattccgccaagcggacc
atgtccatcgcccagcgcctctacgagggcgtggagctcggcacccggggcaccaccgcg
ctgatcacctacatgcgtaccgactccgtgcgcatcgccaaggaggcccaggacgcggcc
aaggagctgatcctggaccggttcggcgcggactactacccgcccaagacccggaatttc
aagaccaagggcggcgcgcaggacgcgcacgaagccatccgccccgttgacgtgaccatc
acccccgagagcgtgaagtccttcctgcccggcgagcagtacaagctgtaccgtctcgtc
tggcagcggttcgtggcctcgcagatggccgcggccaccttctgggacaccacggtgctc
gtctcggccccgcgcaccgtgtggcgcgccaagggcgagcggctgctcttcgcgggcttc
ctggccgccatggacaaggccaagtccgaggacgaggccgagctgcccaagctctccgag
ggcgaagtcctcaagctcaacgagctgaaaaaggaacagaagttcacccagccgccgccg
cgctactcggaagcctccctggtcaagaccctggaggagctcggcatcggccgcccgtcc
acctacgcggccatcatctccaccctgctggagcgcgagtacgcccgccaggaggagaag
cggttcgtgcccaccgagctgggcttcaccgtgtccgaccagctgtccgaacacttccag
gcgctcatggacgtgggcttcaccgcccagatggagaccatgctcgacgacgtggccgac
ggcaaaaaggactggaaggaactgctcaagaatttcggcggcgatttctatcccaccctg
gaaaaggcgcgcaccgagatgggccgctcccagcaggtcacggacatcaagtgcgagaac
tgcggcaagcccatggccgtcaagttcggcaagaccggcgagttcctgggctgcaccggg
ttcccggcctgccggaccatcaagaacttcacccgcgacgaagagggcaacatcgaggtc
gtggaccgcgaaaagcccgaggataccggcgtcacctgcgagaagtgcggccgacccatg
gccatcaagcagtcccggcgcggcgagttcctgggctgcaccggctacccggactgcaag
tccatcgtcaacttcacccgcgacgcggacggcaacatccaggtcgtggagtccgaaaag
cccgaagtggtcggcacctgcccggactgcggcggcgagctgctgctcaagaaggcgcgc
accggctcccggttcatcgcctgctccaactacccggactgcacctatgccgcgccgttc
tccaccggcgttccctgccccaacgaagggtgcgacggcgaactggtcgagaagtcctcg
cgccggggcaagctcttctactcctgctccgcctatcccaagtgcgactacgcggtctgg
aactggcccatcaaagaggagtgccccaagtgcggccacccgatcctcacccgcaaggcc
accaaggacaagggcgagcacatcgcctgccccaagaagggctgcggatacacgaggcca
atcgaagattag
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