Pseudodesulfovibrio indicus: AWY79_00630
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Entry
AWY79_00630 CDS
T04404
Name
(GenBank) ABC-ATPase UvrA
KO
K03701
excinuclease ABC subunit A
Organism
dej
Pseudodesulfovibrio indicus
Pathway
dej03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AWY79_00630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dej03400
]
AWY79_00630
DNA repair and recombination proteins [BR:
dej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AWY79_00630
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AWY79_00630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
AAA_23
AAA_16
nSTAND1
AAA_21
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_33
AAA_22
AAA_25
AAA_18
nSTAND3
A24_N_bact
ATPase
NACHT
RNA_helicase
ATPase_2
BCA_ABC_TP_C
YhfH
Rad17
PhoH
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AMK12874
UniProt:
A0A126QSF7
LinkDB
All DBs
Position
complement(116785..119550)
Genome browser
AA seq
921 aa
AA seq
DB search
MNKTSDIKSIHIEGARHHNLKDLTLDIPREQLVVICGPSGSGKSTLAFDIVYAEGQRRYV
ESLSAYARQFLPQMDKPDVDKVEGLSPAISLEQQTATRNPRSTVGTVTEVYDFLRVFFAR
LGKFYCPSCGKPIEAQTTDEIVERILAMEEGARFMILAPLVEHQKGTHKDLFAKLKKDGF
VRVRVGGELYSLDEVPELEKNKKHTIDLVVDRLVLKEGIKKRLADSVELALDKGDERLIL
SVVGGDKAGDTVMSTLSTCPSCKISMPRLTPQLFSFNSPQGACETCNGIGSVEYFEPDLI
APNKGLSLDEGGVIPWNNATRQRQYGPQLKKLGKQHGFTMDTPLADFSTEAWSALFYGDR
ETGWPGVVPILEYGQQQSGVWDHWTARFQQSRPCPSCNGARLKPEALAVRVADKNMVEFT
SMSIQRALEWLQGLEFSGHDTLISEPLLKELTHRLGFMVNVGLEYLSLGRNMATLSGGEA
QRIRLASQLGSGLVGVTYVLDEPSIGLHPRDNQRLLDTLRSLQSRGNTVLVVEHDEPTIR
EADHVIEIGPSSGWLGGEIVFQGKVDDLLKADSLTGKYLRGDLFIAPPEKRRKAKGEIVL
KGVKTNNLKSLDVSFPLKTMTCVTGVSGSGKSSLVMDSLYKHLLLHRGQKANDPGKIGGI
EGLDKIEKVISIDQSPIGRTPRSNPATYTKIFDEIRKIFAGAKESRKRGYQPGRFSFNVK
GGRCEACKGDGQIRVEMHFLPDVYVTCEACKGKRYNAQTLEVEYKGKNISEVLDMTVRQA
REFFSNHPALMRKLDVLAEVGLEYLRLGQPATTLSGGEAQRIKISRELGKRSLPGALYIL
DEPTTGLHMHEVGKLIRVLHALVDKNATVVVIEHNTDVVMASDHVIDLGPGGGEHGGRIV
ASGTPEEIIANPDSVTGKFLV
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacctccgacatcaagtccatccatatagaaggcgcccggcaccacaacctc
aaggacctgaccctggacatcccccgcgaacagctggtggtgatctgcggcccgtccggg
tcgggcaagtccacgctggcgttcgacatcgtctacgccgagggccagcgccgctacgtc
gaatccctttccgcctacgcccgccagtttctgccccagatggacaagccggacgtggac
aaggtcgaggggctgtccccggccatctcgctggaacagcagaccgccacccgcaacccg
cgctccaccgtgggcacggtgaccgaggtctacgactttctgcgcgtgttcttcgcgcgg
ctcggcaagttctactgcccgtcctgcggcaagcccatcgaggcccagaccacggacgag
atcgtggagcgcatcctggccatggaggagggcgcccggttcatgatcctggccccgctg
gtcgagcaccagaaggggacccacaaggacctcttcgccaagctcaagaaggacggcttc
gtgcgcgtgcgcgtgggcggcgagctgtactccctggacgaggtcccggaactggagaag
aacaagaagcacaccatcgacctggtggtggaccggctggtcctcaaggagggcatcaag
aagcggctggccgactcggtggaactggccctggacaagggggacgagcggctcatcctg
tccgtggtcggcggcgacaaggcgggcgacaccgtcatgtccaccctgtccacctgcccg
tcgtgcaagatttccatgccccggctgaccccgcagctcttctccttcaactcgccccag
ggcgcgtgcgagacctgcaacggcatcggctccgtggagtatttcgagccggaccttatc
gcgcccaacaagggcttgtccctggacgagggcggcgtgatcccctggaacaacgccacc
cgccagcgccagtatggcccgcagctcaagaagctcggcaagcagcacggcttcaccatg
gacaccccgctggccgatttttccaccgaggcatggtccgcgctgttctacggcgaccgc
gagacgggctggcccggcgtggtccccatcctggaatacggccagcagcagtccggcgtc
tgggatcactggaccgcccggtttcagcagtcgcggccctgcccgtcctgcaacggcgcg
cggctcaagcccgaggcgctggccgtgcgcgttgcggacaagaacatggtcgagttcacc
tccatgtccatccagcgcgccctggaatggcttcaggggctcgaattctccggccacgac
acgctcatctccgagccgctgctcaaggaactgacccaccggctcggcttcatggtcaac
gtggggttggagtacctttcgctcggccggaacatggccaccctgtccggcggcgaggcc
cagcgcatccggctggcctcccagctggggtccggcctggtgggcgtgacctacgtgctg
gacgagccgtccatcggcctgcacccgcgcgacaaccagcggctcctggacaccctgcgc
tccctgcagagccggggcaacaccgtgctcgtggtggagcacgacgagccgaccatccgc
gaggcggaccacgtcatcgagatcggccccagctcgggctggctcggcggcgaaatcgtg
ttccagggcaaggtcgacgacctgctcaaggcggactccctgaccggcaagtatctgcgc
ggcgacctgttcatcgcgcccccggagaagcggcgcaaggccaagggggagatcgtcctc
aagggcgtgaagaccaacaacctcaagagcctggacgtgtccttcccgctcaagaccatg
acctgcgtgaccggcgtgtccggctcgggcaagtcttccctggtcatggattccctgtac
aagcacctgctcctgcatcgcggccagaaggccaacgatcccggaaagatcggcggcatc
gaggggctggacaagatcgagaaggtcatctccatcgaccagtcgcccatcggccgcacc
ccgcgctccaacccggccacctacaccaagatattcgacgagatcagaaagatcttcgcc
ggtgccaaggagtcccgcaagcgcggctaccagcccggccggttctcgttcaacgtcaag
ggcgggcggtgcgaggcgtgcaagggcgacggccagatccgggtggagatgcacttcctg
cccgacgtgtacgtgacctgcgaggcgtgcaagggcaagcggtacaacgcccagaccctg
gaggtggagtacaagggcaagaacatctccgaggtcctggacatgaccgtgcgccaggcg
cgcgagttcttctccaaccacccggcgctcatgcgcaagctggacgtgctggccgaggtg
gggctggaatacctgcggctgggccagcccgccaccaccctgtccggcggtgaggcccag
cggatcaagatttcgcgcgagctgggcaagcgcagccttcccggcgcgctctacatcctg
gacgagccgaccaccggcctgcacatgcacgaggtgggcaagctcatccgcgtgctgcat
gccctggtggacaagaacgccaccgtggtggtcatcgagcacaacacggatgtggtcatg
gcctcggatcacgttattgatcttggccccggcggcggcgagcacggcgggcggattgtg
gcgtccggcaccccggaggagatcattgccaatcccgattccgtgaccgggaagtttttg
gtctga
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