Pseudodesulfovibrio indicus: AWY79_01680
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Entry
AWY79_01680 CDS
T04404
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03089
RNA polymerase sigma-32 factor
Organism
dej
Pseudodesulfovibrio indicus
Brite
KEGG Orthology (KO) [BR:
dej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dej03021
]
AWY79_01680
Transcription machinery [BR:
dej03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AWY79_01680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
Sigma70_r3
KORA
HTH_11
GntR
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AMK09911
UniProt:
A0A140D9P4
LinkDB
All DBs
Position
347841..348950
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AA seq
369 aa
AA seq
DB search
MTSEKTTTVVEPEILENDEDGFEDTDLDDTDFDDDFADDDLDGDVFDGSSDDDSEDDAPR
IPAKARGLEDKLPALSTPSSKAVRVRDPLQLYLKEIARFPMLEPEEEYALAKRVQEENDQ
DAAFKLVSSHLRLVVKIAMDFQRRWMQNGLDLIQEGNVGLLKAVTKFDPEKGIKFSYYAA
FWIKAYILKYIMDNWRMVKIGTTQTQRKLFYNLNKERQRLQTMGFDPSTEVLSERLGVTE
AEIDEMDQRLSKNDMSLNTPLGEDSDATRMDFLPSLAPGVEESIANGQIVDLLLDNIREI
RPLLNDKELAILDQRLLSDDPVTLREIGEEYGVTRERVRQIEARLLSKIRDHLTDRVKDF
SKDWVLEQE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgaaaaaacgaccaccgtggtcgagccggagatcctcgaaaatgatgaggac
ggcttcgaggacacggatcttgacgacactgacttcgacgatgattttgccgacgacgac
ctggacggcgacgttttcgacggctcttcggacgacgactccgaggacgacgcgccgcgg
attccggccaaggcacgcgggctggaggacaagcttccggccctgagcacgccctcgtcc
aaggcggtgcgggttagggacccgctccagctctatctcaaggagatcgcccgcttcccc
atgctcgaacccgaagaggagtacgcgctggccaagcgggtgcaggaggagaacgaccag
gacgcggccttcaagctggtgtcctcgcacctccggctggtggtcaagatcgccatggac
tttcagcgccgctggatgcagaacggactcgacctcatccaggaaggcaacgtcggcctg
ctcaaggccgtgaccaagttcgaccccgagaagggaatcaagttctcctactacgcggcg
ttctggatcaaggcgtacatcctgaagtacatcatggacaactggcggatggtcaagata
ggcaccacccagacccagcggaagctcttttacaatctgaacaaggagcggcagcgcctc
cagaccatgggtttcgacccgtccaccgaggtgctgagcgagcggctcggcgtgaccgag
gccgagatcgacgagatggaccagcggctgtccaagaacgacatgtcgctgaacaccccg
ctgggcgaggactccgacgccaccaggatggacttcctgccgtcgctggcccccggcgtg
gaggaatccatcgccaacggccagatcgtggacctgctgctggacaacatccgggagatc
cgccccttgctgaacgacaaggaactggccatcctcgaccagcggctgctgtccgacgac
cccgtgaccctgcgcgaaatcggcgaggagtacggcgtcaccagggagcgcgtgcgccag
atcgaggcccggctgctgtccaagatccgcgatcacctgaccgacagggtcaaggatttc
tccaaggactgggttctggaacaggaataa
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integrated database retrieval system
