Pseudodesulfovibrio indicus: AWY79_02015
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Entry
AWY79_02015 CDS
T04404
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
dej
Pseudodesulfovibrio indicus
Pathway
dej03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AWY79_02015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dej03400
]
AWY79_02015
Enzymes [BR:
dej01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
AWY79_02015
DNA repair and recombination proteins [BR:
dej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AWY79_02015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AMK09974
LinkDB
All DBs
Position
414192..415037
Genome browser
AA seq
281 aa
AA seq
DB search
MFLGSHMSIAGGLHMAFERIRRVGGTALQIFTRNQRQWKVPELTDYDAELFAMAWEQWGD
YPIAAHDSYLINLASDKPDLLSRSLLAFAEELRRIEKLSVPYLVTHPGSHLGAGAEEGIR
RYAANLDRAIEDSGTAGAMVLLETTAGQGTNLGSTFEELAAIIDASAHPDRLGVCYDTCH
TFAAGYDIRTPEAYAATFDAFDRIIGIDRLKFFHLNDTKNEFGSHKDRHEHIGRGEIGEA
GFANIVRDPRFRDIPMTLETPKDDDLQDDVRNLTLLRSLAK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgggttcgcacatgtccattgccggaggcctgcacatggccttcgagcgcatc
cggcgggtggggggcacggccctgcagatcttcacccgcaaccagcgccagtggaaggtc
ccggagctgaccgattacgacgccgagctcttcgccatggcctgggaacaatggggcgat
taccccattgccgcccacgactcctacctgatcaacctcgcctcggacaaacccgacctc
ctgagccgctcgctcctcgcctttgccgaggagttgcggcgcatcgaaaagctctccgtg
ccctacctcgtgacccaccccggctcgcatctgggcgcgggcgcggaagagggaatcagg
cgctacgccgccaacctggaccgggccatcgaggactccggcaccgccggggccatggtc
ctgctggagaccacggcgggccaggggaccaacctcggttccaccttcgaggagctggcg
gcgatcatcgatgcctcggcccacccggaccggctcggcgtgtgctacgacacctgccac
acctttgccgcgggctacgacatccgcaccccggaagcctacgctgccaccttcgacgcc
tttgaccggatcatcgggatcgaccgcctcaaattcttccacctcaacgacaccaagaac
gaattcggctcccacaaggaccgccacgagcacatcggccggggagagatcggcgaggcg
ggcttcgccaacatcgtgcgcgaccccaggttccgggacatccccatgaccctggagacc
cccaaggacgacgatctccaggacgacgtccgcaacctgaccctgttgcgcagcctggcg
aaatag
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