Pseudodesulfovibrio indicus: AWY79_04290
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Entry
AWY79_04290 CDS
T04404
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dej
Pseudodesulfovibrio indicus
Brite
KEGG Orthology (KO) [BR:
dej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dej03009
]
AWY79_04290
Enzymes [BR:
dej01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AWY79_04290
Ribosome biogenesis [BR:
dej03009
]
Prokaryotic type
ribosomal protein modification factors
AWY79_04290
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
AMK10389
UniProt:
A0A126QKT6
LinkDB
All DBs
Position
complement(927720..929048)
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AA seq
442 aa
AA seq
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MSELSATAVRTYTVSLGCPKNRVDTERLLGALGSHMVPVDEFDDADLILINTCGFIQPAT
EESVATILDAVRDAAELLETTGRKPLVCVAGCLVSRYGQDLKDDLPEVDLWLNTEEIELW
PAMAARALALNLPGDTPRNLSTGPAYAYLKVSEGCSHNCRFCTIPSIRGPHKSWPVPFLL
DEARLLSSQVPEIIVVGQDSTAYGSDLGSGHDLPALLKGLAAIPTIEWLRIMYLYPAGLT
ESLLGLLRDTGKPFLPYFDIPLQHAHPDVLASMGRPFARNPEKVIDRVRSFFPEAALRTT
FIVGYPGETEAHFQALMDFVKRTRFHHLGVFPYWAEDGTPAAAMDDQVPDEVKIARRDAL
MALQAEISGEIMAGYVGETVPVLIEKESEEWPGLYVGRAWFQAPEVDGVTYVGSPPDAPL
ELGSIVEVEIEKAGVYDLSGLV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaattatcggccactgccgttaggacatacaccgtcagcctgggctgtcccaag
aaccgcgtggacacggagcggctgctcggcgcgctgggatcgcacatggtcccggtggac
gaattcgacgacgccgacctgatcctgatcaacacctgcggcttcatccagcccgccacc
gaggagtccgtggccaccatcctggacgccgtgcgcgacgccgccgagctgctcgaaacc
accgggcgcaagccgctggtctgcgtggctgggtgcctggtctcccgctacggccaggac
ctcaaggacgacctgcccgaggtggacctgtggctgaacaccgaggagatcgagctgtgg
cccgccatggccgcgcgcgccctggccctgaacctgcccggcgacaccccgcgcaacctc
tccaccggcccggcctacgcctatctcaaggtctcggaagggtgctcgcacaactgccgg
ttctgcaccatcccgtccatccgggggccgcacaagagctggcccgtgccgttcctgctg
gacgaggcccggctgctctcctcccaggtcccggagatcatcgtggtcggccaggactcc
acggcctacggctcggacctcggctccggtcacgacctgcccgccctgctcaaggggctg
gccgccatcccgaccatagaatggctgcggatcatgtatctctacccagccgggctgacc
gagtccctgctcggcctgctgcgcgacaccggcaagccgttcctgccctatttcgacatc
ccgctgcaacacgcccacccggacgtgctcgcgtccatggggcggccttttgcccgcaac
ccggaaaaggtcatcgaccgggtccgctcctttttcccggaggccgccctgcgcaccacc
ttcatcgtgggctaccccggcgagaccgaggcgcacttccaggcgctcatggactttgtc
aaacgcacccggttccaccacctgggcgtgttcccctactgggccgaggacggcacccct
gccgcggccatggacgaccaggtcccggacgaggtcaagatcgcccgccgcgacgcgctc
atggcgttgcaggccgagatcagcggcgagatcatggccgggtatgtgggggagaccgtg
ccggtgctcatcgagaaggagtccgaggagtggcccggcctgtatgtggggcgggcgtgg
ttccaggccccggaggtggatggggttacgtatgtgggctcgccgccggatgcgcccctt
gagttggggagtattgtggaggtggagattgagaaggcgggggtgtatgatttgtcgggg
ttggtgtga
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