Pseudodesulfovibrio indicus: AWY79_04320
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Entry
AWY79_04320 CDS
T04404
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
dej
Pseudodesulfovibrio indicus
Brite
KEGG Orthology (KO) [BR:
dej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dej03016
]
AWY79_04320
Enzymes [BR:
dej01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AWY79_04320
Transfer RNA biogenesis [BR:
dej03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AWY79_04320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AMK10395
UniProt:
A0A126QLV8
LinkDB
All DBs
Position
complement(936289..936846)
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AA seq
185 aa
AA seq
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MARLFVGIGLPETYRQSLSPLTTSLSRLTDNCINWSRPDTWHLTLKFLGETEEARIPAIK
DALSTLDFPRFTLQAGGAGAFPNAQRPKVLWLGLAQGADQAAGLASGIEDALAAVGVPRE
QKRFRPHLTLGRVRRPGPGNHQPLLDAAAQTQWPPFTVNRFTLYQSTLAPTGATHTVLAE
FALAG
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcctgttcgtcggcattggcttaccggagacttaccgtcaatcgctcagcccc
ctcacaacctcactttccaggcttaccgataactgcattaactggtccagacccgacacc
tggcacctgaccctcaagttcctgggcgagaccgaagaggcgcgcattcctgccatcaag
gacgccctctcaaccctcgatttcccccgcttcaccctccaggccgggggcgcgggcgcg
ttccccaatgcccaacgccccaaggtgctctggctcggtctggcccaaggcgccgaccag
gccgccgggctggcctccggcattgaagacgccctcgccgccgtcggcgtgccgcgcgaa
caaaaacggttccgcccgcacctgaccctgggccgggtgcgcaggcccggacccggcaac
caccaaccgctcctggacgccgccgcccaaacccaatggccgccgttcaccgtcaaccgg
ttcaccctctaccaaagcaccctcgcccccaccggcgccacccacacggtcctggccgag
tttgcgctggctgggtga
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