Pseudodesulfovibrio indicus: AWY79_11015
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Entry
AWY79_11015 CDS
T04404
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
dej
Pseudodesulfovibrio indicus
Brite
KEGG Orthology (KO) [BR:
dej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dej03009
]
AWY79_11015
Ribosome biogenesis [BR:
dej03009
]
Prokaryotic type
ribosomal protein modification factors
AWY79_11015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
TPR_2
TPR_1
TPR_9
TPR_16
TPR_12
TPR_8
TPR_19
TPR_7
TPR_CcmH_CycH
TPR_11
Coatomer_E
T7SS_EccA1_N
SHNi-TPR
PknG_TPR
ARM_TT21_C
Motif
Other DBs
NCBI-ProteinID:
AMK11607
LinkDB
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Position
2462364..2464091
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AA seq
575 aa
AA seq
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MMELKSCLKTFTTDLDKACSPVDTVKRVKAILDEKCAGVLAKTDRVDTGRLGIPVFVSIC
GPEAREIMPTRKQMGKGASPEQAEASALMELVERFSYFSFWGDPDNFTELTWSEAQAKWP
GQVMDIGQVIRSVSEDIDPDKAVRLMDLIRWRFHPALNVCTGEREYVPLDWFKKLNEFNG
SSAGNTFEESIAQGACELVERHVCAVIDRTRQTTPTIDPATCTDPVLKRLLDCFEQNGVS
LILKDFSLGYPVPTVAAVAWDRKTFPALSEIVFTAGTAASPVKAAIRAVTEVAQLAGDFE
TSRVYEASGLPKFTELSQLDWLKEGETVALDSLPSVEDADIYNELMGLAGGLAEKGDTLY
AVDTRHPDLMVTANYNFVPGFDFRERTPNRSIGLFVGRILAEDADFDEALEGLDVIEDVY
PGAYFLPFFRGLLALRMGDLPYAADRFEESVPLQPADPERALAVFYQAYALTQMEEWEDA
ETLLGEAVALDDECREFFNLRGVSRFKQGNFEAAAEDFQASLNIDSGSPHDLANLGLCHK
NMGNDEVAMDYLQAALDMDPALDYARESLNELMES
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
gtgatggaactcaagagctgtctcaagaccttcaccaccgacctggacaaggcgtgcagc
ccggtggataccgtgaagcgggtcaaggcgatcctcgacgagaagtgcgcgggcgtgctg
gccaagaccgaccgcgtggacaccggcaggctgggcatccccgtgttcgtcagcatctgc
ggccccgaggcccgcgagatcatgcccacccgcaagcagatgggcaagggcgcgtccccg
gagcaggccgaggcgtccgccctcatggagttggtggagcggttctcctacttcagcttc
tggggcgacccggacaatttcaccgagctgacttggtccgaggcgcaggccaaatggccc
ggacaggtcatggacatcggccaggtgatccgttccgtgagcgaggacatcgatccggac
aaggcggtccggctcatggacctgatccgctggcggttccacccggcgctcaacgtgtgt
accggcgagcgggagtacgtgccccttgactggttcaagaagctcaacgaattcaacggc
tcttccgcgggcaacaccttcgaggagtccattgcccagggtgcgtgcgaattggtggag
cggcacgtctgcgcggtcatcgaccgcacccggcagaccaccccgaccatcgacccggcc
acctgcaccgacccggtcctcaagcggctgctcgactgtttcgagcaaaacggcgtcagc
ctgatcctcaaggacttctctttgggctatccggtgcccaccgtggcggccgtggcctgg
gaccgcaagaccttccccgccctgagtgagatcgtcttcaccgcgggcacggcggcgtcg
ccggtcaaggcggccatccgggccgtgaccgaggtggcgcagctggccggagacttcgag
accagccgggtctacgaggcgtcaggcctgcccaagttcaccgagctctcccaactggac
tggctcaaggagggcgagaccgtggccctcgactccctgccttcggtggaggacgcggac
atctacaacgagctcatggggctggccggagggctggcggagaagggcgataccctgtac
gccgtggatacccggcaccccgacctgatggtcaccgccaactacaacttcgtgcccggc
ttcgacttccgcgagcgcacgcccaaccggtccatcgggttgttcgtgggccgcatcctg
gccgaggacgcggacttcgacgaggccctggaggggctggacgtgatcgaggatgtctat
cccggcgcgtacttcctgccgttcttccgggggctgctcgccctgcgcatgggcgacctg
ccgtacgccgccgaccggttcgaggaatccgtgccgctccagcccgccgaccccgagcgc
gccctggccgtgttctaccaggcctatgccctgacccagatggaggagtgggaggacgcc
gagacgctgctcggcgaggccgtcgccctggacgacgaatgccgcgaattcttcaacctg
cgcggggtttcccggttcaagcaggggaatttcgaggccgccgccgaggacttccaggcg
tccctgaacatcgacagcggctcgccccatgacctggccaatctcggcctgtgccacaag
aacatggggaacgacgaggtcgcgatggattacctccaggcggccctggatatggacccg
gccctggactacgctcgtgaaagtttgaacgaactcatggaatcctag
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