Pseudodesulfovibrio indicus: AWY79_12660
Help
Entry
AWY79_12660 CDS
T04404
Name
(GenBank) DNA-binding protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dej
Pseudodesulfovibrio indicus
Brite
KEGG Orthology (KO) [BR:
dej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dej03019
]
AWY79_12660
Messenger RNA biogenesis [BR:
dej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AWY79_12660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
AMK11904
UniProt:
A0ABM5YXB5
LinkDB
All DBs
Position
2794279..2795319
Genome browser
AA seq
346 aa
AA seq
DB search
MASSVGKKSQYIQSLSPGQPVDDMFLIAGANQAQSKNGPYWNLTFQDATGSVDGKIWSPK
SLEYPNIEPGWMARVRGFVESYRERNQLKVDHMELLPTPGPDVDLADFMPASKIPPRELM
EALEDLVTEHMKHKPWKTFCRKVLGNEEVRAKLLTAPGAKTVHHAYVGGLLEHTLGVAKA
CMALCDVYPDLDRQTLLAGAIFHDLGKAWELSGGLANDYTDEGRLFGHIQIGVEKLEPFL
ARSNRLEEGLKLHLKHLITSHHGEHEFGSPVRPKTPEAFVLHFADNMDAKLNMIDQAYDE
MDKTGAAWSPYLRFLERNVFRPEPTPGQAGKQSAKPENQCLLPLKA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcaagctcagtgggtaaaaagtcgcaatatatacaaagtctgtctcccggccagccg
gttgacgacatgtttctcatcgccggggccaatcaggcgcagtccaagaacggtccctac
tggaacctcacctttcaagacgccacggggtccgtggacggcaagatatggagccccaag
agcctggaatacccgaacatcgagccgggctggatggcccgcgtccggggcttcgtggag
agctaccgcgagcgcaaccagctcaaggtggaccacatggagctgctgcccacgcccggc
cccgacgtggacctggccgatttcatgcccgcgtccaagatcccgccgcgcgaactcatg
gaggcgcttgaggacctggtcaccgaacacatgaagcacaagccgtggaagaccttctgc
cgcaaggtgctgggcaacgaggaggtccgggcgaagctgctgaccgcgccgggcgccaag
accgtgcaccacgcctacgtgggcggtctgctggagcacaccctgggcgtggccaaggcg
tgcatggccctgtgcgacgtctacccggacctggaccgccagaccctgctggccggggcc
atcttccacgacctgggcaaggcgtgggagctgtccggcggcctggccaacgactacacc
gacgagggccgcctgttcggccacatccagatcggcgtggagaagctggagccgttcctg
gcccgcagcaaccggctggaggaaggtctcaagctccatctcaagcatctgatcaccagc
catcacggcgaacacgagttcggctccccggtccggcccaagaccccggaggcgttcgtc
ctgcactttgcggacaacatggacgccaaactgaacatgatcgaccaggcctacgacgag
atggacaagaccggggccgcctggtcgccctacctccgcttcctggagcgcaacgtgttc
aggccggaaccgacccccggccaggccgggaagcagtccgcaaaaccggagaaccaatgt
ttattacctttgaaggcatag
DBGET
integrated database retrieval system