KEGG   Pseudodesulfovibrio indicus: AWY79_12660
Entry
AWY79_12660       CDS       T04404                                 
Name
(GenBank) DNA-binding protein
  KO
K03698  3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dej  Pseudodesulfovibrio indicus
Brite
KEGG Orthology (KO) [BR:dej00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dej03019]
    AWY79_12660
Messenger RNA biogenesis [BR:dej03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AWY79_12660
SSDB
Motif
Pfam: HD tRNA_anti-codon TraI_2 Cas3_HD
Other DBs
NCBI-ProteinID: AMK11904
UniProt: A0ABM5YXB5
LinkDB
Position
2794279..2795319
AA seq 346 aa
MASSVGKKSQYIQSLSPGQPVDDMFLIAGANQAQSKNGPYWNLTFQDATGSVDGKIWSPK
SLEYPNIEPGWMARVRGFVESYRERNQLKVDHMELLPTPGPDVDLADFMPASKIPPRELM
EALEDLVTEHMKHKPWKTFCRKVLGNEEVRAKLLTAPGAKTVHHAYVGGLLEHTLGVAKA
CMALCDVYPDLDRQTLLAGAIFHDLGKAWELSGGLANDYTDEGRLFGHIQIGVEKLEPFL
ARSNRLEEGLKLHLKHLITSHHGEHEFGSPVRPKTPEAFVLHFADNMDAKLNMIDQAYDE
MDKTGAAWSPYLRFLERNVFRPEPTPGQAGKQSAKPENQCLLPLKA
NT seq 1041 nt   +upstreamnt  +downstreamnt
atggcaagctcagtgggtaaaaagtcgcaatatatacaaagtctgtctcccggccagccg
gttgacgacatgtttctcatcgccggggccaatcaggcgcagtccaagaacggtccctac
tggaacctcacctttcaagacgccacggggtccgtggacggcaagatatggagccccaag
agcctggaatacccgaacatcgagccgggctggatggcccgcgtccggggcttcgtggag
agctaccgcgagcgcaaccagctcaaggtggaccacatggagctgctgcccacgcccggc
cccgacgtggacctggccgatttcatgcccgcgtccaagatcccgccgcgcgaactcatg
gaggcgcttgaggacctggtcaccgaacacatgaagcacaagccgtggaagaccttctgc
cgcaaggtgctgggcaacgaggaggtccgggcgaagctgctgaccgcgccgggcgccaag
accgtgcaccacgcctacgtgggcggtctgctggagcacaccctgggcgtggccaaggcg
tgcatggccctgtgcgacgtctacccggacctggaccgccagaccctgctggccggggcc
atcttccacgacctgggcaaggcgtgggagctgtccggcggcctggccaacgactacacc
gacgagggccgcctgttcggccacatccagatcggcgtggagaagctggagccgttcctg
gcccgcagcaaccggctggaggaaggtctcaagctccatctcaagcatctgatcaccagc
catcacggcgaacacgagttcggctccccggtccggcccaagaccccggaggcgttcgtc
ctgcactttgcggacaacatggacgccaaactgaacatgatcgaccaggcctacgacgag
atggacaagaccggggccgcctggtcgccctacctccgcttcctggagcgcaacgtgttc
aggccggaaccgacccccggccaggccgggaagcagtccgcaaaaccggagaaccaatgt
ttattacctttgaaggcatag

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