Pseudodesulfovibrio indicus: AWY79_15000
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Entry
AWY79_15000 CDS
T04404
Name
(GenBank) radical SAM protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
dej
Pseudodesulfovibrio indicus
Brite
KEGG Orthology (KO) [BR:
dej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dej03016
]
AWY79_15000
Enzymes [BR:
dej01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
AWY79_15000
Transfer RNA biogenesis [BR:
dej03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
AWY79_15000
Prokaryotic type
Methylthiotransferases
AWY79_15000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
B12-binding
EAD2
Motif
Other DBs
NCBI-ProteinID:
AMK12321
UniProt:
A0A126QQQ8
LinkDB
All DBs
Position
complement(3275927..3277225)
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AA seq
432 aa
AA seq
DB search
MTTFHTATLGCKINQYETRSIAEAWAGRDAVETDDPRAADLILVNSCAVTANAVADLRQT
VRRFHRDNPAAEIIVTGCAAQVMPEELAALPGVVRVVAQADKADLLGGPMTPATPAPASE
KPRFAPFSISGYGRARAVVKVQDGCSHFCTYCIVPLTRGRSVSRPVAEVADEIARLFGAG
FREFILSGINLRHFGRDLESKPDFWDLVAELERTFAPDWAGRARLRISSVEPGQLTDKAL
DVLSSSRLVCPQLHLSLQSGDPQVLKAMGRGHYSPRSAVDFMDRLKGAWPVMGLGADLIT
GFPGETEAQFENTMELCRELPLTYGHVFPYSERPGTRAAELPGAVDVPVRKERAARLRKL
IGRRKAAFLKRLLDLDHLDVLVQDDRGRGVSEYYAACRFEQPPGAAPRSLVRARPLRVER
GVVIVEPWEASE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgacaacctttcataccgctaccctgggttgcaagatcaaccagtacgagacccgctcc
atcgccgaggcatgggccgggcgagacgccgtggagacggacgacccgcgcgcggcggac
ctcatcctggtcaactcctgcgcggtcacggccaacgccgtggccgacctgcgccagacc
gtgcgccgcttccaccgcgacaacccggcggcggagatcatcgtcaccgggtgcgcggcc
caggtcatgcccgaagagctggcagcgctgcccggcgtggtccgggtggtggcccaggcg
gacaaggcggacctcctgggcggtcccatgaccccggcaactcccgcaccggcatcggag
aagccccggttcgcgcctttttccatctccggctacggccgggccagggccgtggtcaag
gtccaggacggctgttcccatttctgcacctactgcatcgtgcccctgacgcgcgggcgg
tccgtgagccgtcccgtggccgaggtcgcggacgagatcgcccgcttgttcggcgcgggg
ttccgcgagttcatcctgagcggcatcaacctgcgccacttcgggcgcgatctcgaatcc
aagcccgacttctgggacctggtggccgaactggagcggaccttcgccccggactgggcg
gggcgcgcccggctgcgcatctcctcggtggagccgggccagctcacggacaaggcgctg
gacgtcctgtcctcatcccggctggtctgcccgcagctccatctctcgctccagagcggc
gacccgcaggtcctgaaggccatgggacgcggccattattcgccacggtccgccgtggac
ttcatggaccggctcaagggtgcgtggccggtcatggggctgggcgcggacctgatcacc
gggtttcccggcgagaccgaggcgcagttcgagaacaccatggagctgtgccgcgaactc
ccgctgacctacggccacgtctttccctactccgagcggcccggcaccagggcggccgag
ctgcccggcgcggtggacgtgccggtgcgcaaggagcgggcggcccgtctgcgcaagctc
atcgggcgcaggaaggccgccttcctcaagcgccttctcgacctggaccatctggacgtg
ctggtccaggacgaccggggacgcggggtcagcgagtactacgcggcctgccggttcgaa
cagcctcccggagccgcgccgcgctccctggtccgggcgcgcccgttgcgcgtggagcgg
ggcgtggtcatcgtcgagccgtgggaggcaagcgaatga
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