Desulfoluna limicola: DSLASN_00960
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Entry
DSLASN_00960 CDS
T07859
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
dek
Desulfoluna limicola
Pathway
dek00470
D-Amino acid metabolism
dek00550
Peptidoglycan biosynthesis
dek01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DSLASN_00960 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DSLASN_00960 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dek01011
]
DSLASN_00960 (murD)
Enzymes [BR:
dek01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
DSLASN_00960 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
dek01011
]
Precursor biosynthesis
Amino acid ligase
DSLASN_00960 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
MurD_N
TrkA_N
2-Hacid_dh_C
HerA_C
NAD_binding_7
DAO
AdoHcyase_NAD
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
BCS94464
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All DBs
Position
complement(119086..120441)
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AA seq
451 aa
AA seq
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MKLSGKKIVVVGLARSGASIARFLAERDARVVVSDAKPREALGEFPDAMEAEGIDLDLGG
HTNHLFETADLVVLSPGVPHTLAPIKRAREMGVSVVGEIELASRFIEAPILAVTGTNGKT
TTTSLLAEMLSASGKTVFTGGNIGTPLTEYLRSGEPADVVVVEVSSFQLDTIDTFRPDVA
VLLNITDDHLDRYPDFDAYKRSKGRVFENQRQEDVAILNTADPHVADISRILRNRKLTIG
GEGPNAAAVTREQVTIRTSGLPEVRIDLSQSRLVGQHNRENIATAALAALSAGATPEGIQ
EAVNTFKGLPHRIEYVDTVSGVRFYNDSKATNIDAVEKAVTGFDTPIVLIMGGRYKGGLF
ASLAEALKKKARAIIAIGEAKKKIVSSLGPCIKTVEAEGLDDAVDKAFSKARPGDAVVLS
PACSSFDMFTNYNERGDKFRESVRRLKEQHG
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttccggcaaaaaaattgttgtggtgggactggcccgatccggtgcttccatc
gcccgttttcttgcagagcgtgacgcccgggtcgtcgtcagcgacgccaaacctcgggag
gcgctgggtgagttccccgacgccatggaggccgaagggattgaccttgatctgggcggc
cacaccaatcacctctttgaaacggcggacctcgtggtgctgagccccggcgttccccac
accctggcccccatcaagagagcccgtgagatgggtgtctccgtggtgggcgagatcgaa
ctggcgtcccggtttattgaggcgcccattctggccgtcaccggcaccaacggaaagacc
accaccacctcccttctggctgagatgctctcggcctcgggaaagactgtctttaccggg
ggcaacatcggcacccccctcaccgagtaccttcgctccggcgagcccgccgatgtggtg
gttgtggaggtaagcagctttcagctcgacaccatcgacaccttccgccccgatgtggcg
gtgcttctcaacatcaccgacgaccacctggaccgctacccggatttcgacgcctacaag
cgatccaagggacgtgtctttgaaaaccaacggcaggaggatgtggccatcttaaacacc
gccgatccccatgtcgcggacatcagccgcatcctcagaaaccgaaagctcaccatcgga
ggggaaggccccaatgcagcggccgtcacccgagagcaggtcaccatccgaacctccggg
cttcccgaggtgcgcattgatctctcccaatcacgcctggtggggcagcacaaccgtgaa
aacatcgccacagcggccctggccgctctgtctgccggcgccacccccgaaggcattcag
gaggcggtcaacaccttcaaggggttgccacaccgcatcgagtacgtggacaccgtatcc
ggggttcggttttacaacgactccaaggccaccaacatcgatgccgtggaaaaagcggtc
accggctttgacacccccatcgtccttatcatgggggggcggtacaaaggggggctgttc
gcctccctcgccgaggcactgaaaaagaaggcccgagccatcatcgccataggcgaggca
aaaaaaaaaatcgtttcatccctgggtccctgcatcaaaacagttgaggctgaggggtta
gacgacgctgtggacaaggccttctccaaggccaggcccggggacgccgtggtcctctct
ccggcctgttccagctttgatatgttcaccaactacaacgagcggggcgacaagttccgt
gaatcggtccgccgactgaaagaacagcatggctaa
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