Desulfoluna limicola: DSLASN_13600
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Entry
DSLASN_13600 CDS
T07859
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
dek
Desulfoluna limicola
Pathway
dek00550
Peptidoglycan biosynthesis
dek01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DSLASN_13600 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dek01003
]
DSLASN_13600 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dek01011
]
DSLASN_13600 (mrcB)
Enzymes [BR:
dek01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
DSLASN_13600 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DSLASN_13600 (mrcB)
Glycosyltransferases [BR:
dek01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
DSLASN_13600 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
dek01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
DSLASN_13600 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
PBP_1A_C
UvrB_inter
PWWP_KDM3B
Motif
Other DBs
NCBI-ProteinID:
BCS95728
UniProt:
A0ABN6F1Q0
LinkDB
All DBs
Position
1652278..1654578
Genome browser
AA seq
766 aa
AA seq
DB search
MIRWIKYCVKAGIALGLLGLIAASIYCWHLTGLVEDRFSGRKWQIPSVIYSDTTLLYTGR
KVNLDSFKERLKGIGYRPTGDSPHKKGDYRVSGNELEIYLNDLNVPGKTRFGFPLLLTLK
NNAIASMVRRDSGQPVPILELEPEVLMRYFGKTRELRQVVPIDEIPESLQYAVMAAEDAR
FYTHFGIDPRGILRAVYTNLRHGAIRQGGSTLTQQLAKNYFLTPERTFSRKLNELFISLA
IELKYGKDEILGIYLNEIYFGQKGSASVNGAGEAAKFYFNKRVQDLSLAESATIAGLIKG
PNLYSPYRNMERSLKRRNSVLDSMFKNGWITAADLEEASATPIKVSGFQAYSQTAPYFLD
YVSSQVKEVYPATTLSSMGFSIFTTLDTQVQAAAERALDLGLARLEQKNPKLKRSNPAER
LQGAIVVLQPRTGNILAMVGGRDYKVSQFNRATQAKRQPGSCFKPIVASVLLDQFKPSDI
LSNEKTDYVVDNKTWTPNNFSEQKEKSLTVRDMLRVSSNRAAVDMLVRGGTKRTANRLKQ
FHLSTPVPPWPSMVLGASEVIPMELARAYAVFASDGIQPYPLSLKDVMDETGEFLVGRRM
EIEPVLSPGEAYLITSMLESAVKKGTGRALARYGVDFPVAGKTGTTNNFRDAWFVGYTPD
LLALVWVGFDNNEPIYATGGSAALPIWAELVSAIPGYVSGNAFVPPPDVVNMKVCRESGN
RADGLRCPDAYDEYFLETNLPDDTCSLHSGSSLLDRMGRGIKQLFN
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgattcgctggattaaatactgtgtaaaggcaggcatcgcactggggctcctcggtttg
atagccgcatcaatctattgctggcacctcaccggacttgttgaggatcgtttttcaggc
cggaagtggcagatcccgtcggtgatctattcggataccaccctgttgtacaccggtcgc
aaggtgaacctggattccttcaaggagcgtcttaaaggcatcggttaccggccgacaggg
gactccccgcataaaaagggggattaccgagtgtccggaaatgagcttgagatttacctc
aacgacctcaatgttccgggaaaaacccggttcgggtttccacttctcctgacacttaaa
aacaatgccatcgcctccatggtacgacgggattcggggcagccggtccccattctcgag
ctggaaccagaagtcctcatgcggtattttggcaaaacccgtgagctcaggcaggtggtc
cccattgatgagatccccgaaagcctccagtatgcggtgatggctgccgaagatgcacga
ttctacacccattttggcatcgacccacggggcatcctgagagctgtctacaccaacctg
aggcacggtgccattcgccaggggggctcgacgctgacccagcaactggcaaaaaactac
tttctcaccccggagcgcaccttctcccgaaaactgaacgagcttttcatctcccttgcc
attgagctcaagtatggcaaagacgagatcctcggcatttatctcaacgagatctatttc
ggccagaaaggctcggcatccgtcaacggggcaggggaggcggcaaagttctacttcaac
aaacgggtccaggatctttccctggccgagtccgcaaccattgcaggtctcatcaagggt
ccgaacctctactccccgtacagaaacatggagcggtccctcaagcgccggaacagcgtc
cttgactcgatgttcaagaacggctggatcaccgccgcagaccttgaagaggcctcggca
acgcccatcaaggtctcgggtttccaggcctacagccagacagcgccttattttctggac
tatgtctcctctcaggtaaaagaggtctatcccgccaccaccttgtccagcatggggttt
tccattttcaccaccctggacacccaggtgcaggccgcagcggagcgggcccttgacctg
gggctggcccggctggagcaaaagaacccgaaactaaagcgcagcaaccctgccgagagg
cttcagggtgccatcgtggtgctgcaaccccgaacgggaaacatcctggccatggtcggc
gggcgtgattacaaggtaagccagttcaatcgggccacacaggccaaaaggcagcctggg
agctgtttcaaacccattgtcgcctcggtcctcctggatcaattcaaaccctcggacatt
ctgtccaacgaaaaaaccgattatgtcgtagacaacaagacctggacaccgaacaatttc
agtgaacaaaaagagaagagcctcacggttcgagacatgctccgggtttcaagcaaccgg
gctgccgtggacatgctggttcgaggcggcacaaagcggacggcaaatcggttgaaacag
tttcacctttccaccccggtccccccctggccctccatggtgctcggtgcctctgaagtc
attcccatggagcttgcgagggcttacgcggtttttgcatcggatggcatccagccatac
cccctgtcccttaaagacgtgatggatgaaaccggagagtttcttgtgggcaggcgcatg
gagatcgagcccgtcctttcacccggagaggcgtatctcatcacctccatgctggaaagc
gcggtaaaaaagggaaccgggcgtgcccttgcccggtatggcgtcgattttcccgtggcc
ggaaaaacagggaccaccaacaattttcgagacgcctggtttgtgggctatacccctgat
cttctggccctggtgtgggtggggtttgacaacaacgagcccatatatgccacaggcggt
tctgccgcccttcccatctgggcagagctcgtttcggccattcccggctatgtgtcggga
aatgcctttgttccgccgccggatgttgttaacatgaaggtctgccgggaaagcgggaat
cgtgccgatggcttgcgctgtcctgatgcttacgacgagtatttcctcgaaaccaacctt
ccggatgacacctgttcgcttcacagcgggtcgtcccttctggatcgtatgggccgtggg
ataaagcaacttttcaactga
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