KEGG   Desulfoluna limicola: DSLASN_14460
Entry
DSLASN_14460      CDS       T07859                                 
Symbol
hup
Name
(GenBank) transcriptional regulator
  KO
K03530  DNA-binding protein HU-beta
Organism
dek  Desulfoluna limicola
Brite
KEGG Orthology (KO) [BR:dek00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dek03032]
    DSLASN_14460 (hup)
   03036 Chromosome and associated proteins [BR:dek03036]
    DSLASN_14460 (hup)
   03400 DNA repair and recombination proteins [BR:dek03400]
    DSLASN_14460 (hup)
DNA replication proteins [BR:dek03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    DSLASN_14460 (hup)
Chromosome and associated proteins [BR:dek03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    DSLASN_14460 (hup)
DNA repair and recombination proteins [BR:dek03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      DSLASN_14460 (hup)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG Umbravirus_LDM DUF679
Other DBs
NCBI-ProteinID: BCS95814
UniProt: A0ABM7PF62
LinkDB
Position
1748957..1749226
AA seq 89 aa
MNKGDLVNEVAKVVSSKKEAQAAVDCVLSTITDALTGDDTVTLVGFGTFKAVERKARKGR
NPQTGQEISIDARKVPKFVPGKALKDALK
NT seq 270 nt   +upstreamnt  +downstreamnt
atgaacaaaggtgatctcgtcaacgaagttgcaaaagttgtcagctctaaaaaagaagct
caggctgccgtagattgtgttctctccaccatcaccgatgccctcaccggtgacgatacc
gttaccctcgttggtttcggtactttcaaggccgttgaaagaaaagcccgcaaaggcaga
aacccccagaccggtcaggaaatcagcatcgacgcacgcaaggttcccaaattcgtacct
ggcaaggctctgaaagacgctttgaagtag

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