Desulfoluna limicola: DSLASN_14490
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Entry
DSLASN_14490 CDS
T07859
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
dek
Desulfoluna limicola
Pathway
dek03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSLASN_14490 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dek03400
]
DSLASN_14490 (uvrB)
DNA repair and recombination proteins [BR:
dek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSLASN_14490 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DSLASN_14490 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_16
AAA_22
SWI2_SNF2
Kinesin
nSTAND3
nSTAND_NTPase5
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
BCS95817
UniProt:
A0ABM7PEU5
LinkDB
All DBs
Position
complement(1752205..1754205)
Genome browser
AA seq
666 aa
AA seq
DB search
MEKFKIVSQFTPQGDQPKAIRRLVKELNKGTENQVLLGVTGSGKTFTMAHVVAQMQRPTL
VLAPNKILAAQLYSEFRELFPENAVEYFVSYYDYYQPEAYIPSSDTYIQKDSAINELIDK
MRHSATRNVLSRRDVIVVASVSCIYGLGAPEDYLALRVELSTGEERSREALLKDLVAIQY
ERSDIDFHRGSFRVRGDRVEIFPAYEEKVAIRVEFFGDEIDTLAEFDPLTGKTLRKLKRT
VVYPASHYVTRKSTLKQMLGKVEEELKGRVEHFHRLNKLIEAQRIDERTHLDLEMLREIG
YCNGIENYSRYLSGRNAGDAPPTLLDYFPEDFLLLVDESHIALPQVRAMYKGDRSRKENL
VGFGFRLPSALDNRPLKFEEFEKKRGQAIFVSATPADYEMEAADGAVVEQIVRPTGLVDP
EIVVKPAQNQVDDLYEEIRKRLAAQERVLVTTLTKRMAEDLTDYLTDLGVRVRYMHSDIK
TMERIEIVRDLRIGKFDVLVGINLLREGLDIPEVSLVAVLDADKEGFLRSERSLVQTCGR
AARNANGKVILYGDRITGSMQYAIDETKRRRAIQTAYNKKHGIVPATIIRDIQNSFGDLY
QFDDETVDDGVMEATRVFGDVETDDATLLETLEEKMHEAARNLEFEQAARLRDQVQEIRK
RMGETS
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattcaagatcgtgtcgcaattcaccccgcagggggatcagcccaaggcgatc
cgccgcctggtgaaagagttgaacaaggggacagagaatcaggttctgctgggggtgacg
ggctccggcaagacctttaccatggcccatgtggtggcgcagatgcagcgaccgaccctg
gtccttgcccccaacaagattcttgcggcccagctctacagtgagtttcgtgagcttttt
cctgaaaatgccgtcgagtattttgtcagctattacgactactatcagcccgaagcctac
atcccttccagcgacacctacatccaaaaagactccgccatcaacgagctcatcgacaag
atgcgccactcggccacacgcaacgttctctcacgcagggatgtgatcgtggtggccagt
gtgtcctgcatttacggccttggtgcgccggaagattaccttgccctgagggtggagctt
tccaccggggaggaacgaagccgtgaggccctcttaaaggacctggtggccattcagtac
gaacgcagcgacattgactttcaccgtgggtcgttccgggttcgtggggatcgggttgag
atcttcccagcttatgaggagaaggtggccatccgggtggaatttttcggcgatgaaatc
gacacactggccgaatttgaccccctcaccgggaaaaccctgcgcaagctcaagcgcacc
gtggtctacccggcgagccattatgtcactcgcaagagcaccctgaagcagatgctgggc
aaggtggaggaggagctgaaagggcgtgtggagcattttcatcgcttgaacaaactcata
gaagcccagcgcattgatgagcgaacccatctggaccttgagatgcttcgggagatcggc
tactgcaacggcatcgaaaactactcccgctacctctcgggccgcaacgccggagacgcg
cctcccacccttctggactattttccggaggattttcttctgctcgtggatgagagccac
atcgcccttccgcaggttcgggccatgtacaagggcgacaggtcccgaaaggagaacctg
gtggggtttggcttccgcctgccgtcggccctggacaaccggcccctgaagtttgaggag
ttcgaaaagaaacgaggccaggccatctttgtctccgccactccggctgattatgaaatg
gaggccgccgacggcgcagtggtggagcagattgttcgccccacagggttggtggaccct
gagattgtggtaaagcccgctcaaaaccaggtggatgacctctacgaggagattcgcaag
cggctggcagcccaggagcgggttctcgtcaccaccctgacaaagcgcatggccgaggac
cttaccgattacctgacggatctcggggtgagggtccgctacatgcactctgacatcaag
accatggagcgtatcgagatcgtgcgggatcttcggatcggcaagtttgacgtgctggtg
ggaatcaaccttttgagggagggcctcgatatccctgaggtatcccttgtggctgtcctg
gacgctgacaaggagggctttctccgctccgagcggtccctggttcagacctgcggcagg
gcggcgcgaaacgccaacggcaaggtgattctctacggagacaggatcaccggatccatg
cagtacgccatcgatgaaaccaagcggcggcgggccatccagaccgcctacaacaaaaaa
cacggcatagtgccagccaccatcatccgggacattcagaacagcttcggggatctttac
cagttcgatgacgagacggtggatgatggcgtgatggaggcaacacgtgtcttcggcgat
gtagaaacggatgacgccacgctcctagagaccctggaagagaagatgcatgaagcggca
cggaaccttgaatttgagcaagcagcccgtcttcgggatcaggttcaggagatccggaag
cggatgggggagacgtcgtga
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