Desulfoluna limicola: DSLASN_14880
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Entry
DSLASN_14880 CDS
T07859
Symbol
recC
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
dek
Desulfoluna limicola
Pathway
dek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DSLASN_14880 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dek03400
]
DSLASN_14880 (recC)
Enzymes [BR:
dek01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DSLASN_14880 (recC)
DNA repair and recombination proteins [BR:
dek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DSLASN_14880 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BCS95856
UniProt:
A0ABM7PFK6
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All DBs
Position
complement(1806255..1809500)
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AA seq
1081 aa
AA seq
DB search
MDAGLNLFTGNRLEVLARALSKVLEAPMGNPLEEDVVVLQSQGMARWLSLALSRSNGICA
NVRWRFPNAFLQDMFGVAVPELRDVRRFDAKSAAWKIMGSLPEWVKEPVFLPLANYLGGD
DDPLKRYQISELLADTLDQYLTYRPDMIDEWEEGEGGDFQAVLYRHLHESLGFRHRVHLM
KDFKRYLEDAENKELSFPERVCVFGISSLPEFHMELFTALAKVCQVNLFLLNPCPQYWGD
ILSDAEKRRLKRKKGIEGEGDETLYMEAGNPLLASMGGQGREFFDMLAERGLEEFPLFVE
PEEETLLGSVQADIFHLRDRTRGEVEPFVLNESDRSFTVHSCHSPLREVEVLRDAILAMM
DEDSDLRPSDILVMAPDINTYAPVIEAVFNRRVEGEVRIPFSIADQANKSGDSAVEAILL
LLDLSGFRFEAAGVLELLENDRIRSAFGMAEGDLERVTQWIRETAIRWGIDGEQRGSEGF
ACFEENSWKVGFERLFTGYAVGDDELALFDGTLPAGPVEGDQAVLLGRLVHFMERLTRYV
KGLEQPRSAGAWVSFFEDVLETFLMDEDGAGEGLQGIRDTLYRMADAAREAENEEPVDYS
VVRFIMKTALGAPDPASGFITSGITFCAMLPMRSIPFRVICILGMGHGTFPRQHRAPGFD
LIAANPRRGDRSRRKDDRYLFQEILLSVRETLWISYTGQSIRDNSTLQPSVLLSELLDYV
DGAVEGGASGQIVVNHPLHPFSGDYFQKEGSRLFSYDAASRRVAVRMAESPLSPAPFASL
ADLDREHPMPVQLPLETLEASLAHPSRYLLRDVLGMELGGGGEAPDSCEPFTLQGLERHR
AGSLLFEAILWGESPEKALEVVSGMGLLPRGEVGAHMLRDITREARAVAEALGPLTQDIE
PLFERQWVEISGVGLSGEVGPLFGDVLVVGRFGKVRGQDLVSAWLRLLLAATAGMPVSRA
VVVGLDRKTGGAEVVPMAVPPNPAAVLESLVRLSVAGGEGLLPLFPMASEAYAQEMMKSR
DEAKAMSKAKNAFYGNAFATMADLNDPWIKMAVRGLDPLSSEGFSRCAETLYKPILEART
A
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattgaacctgtttacaggcaatcgtctggaagttctggctcgggccctt
tccaaggtgctggaagcacccatgggaaacccattggaagaggatgtggtggttcttcag
agccagggcatggcccggtggctctcattggccctctcccgcagcaacgggatctgcgcc
aatgtgcgctggcgtttccccaatgccttcctccaggatatgtttggtgttgccgttccg
gaattgagggatgtccgacgatttgacgcgaagagcgccgcctggaagattatgggctct
ctgcccgagtgggtgaaagagcccgtctttttgccccttgccaattacctggggggcgat
gacgatccccttaaacgctatcagatttctgaactcctggcagataccctggaccagtac
ctgacctatcggcccgacatgatcgatgagtgggaagagggcgaagggggtgacttccag
gccgttctttaccgtcacctgcatgaaagcctcgggttccgccatcgcgttcacctgatg
aaagactttaaaaggtatctggaagatgctgaaaacaaagagttaagttttccggagcga
gtgtgcgtgttcggtatttcctcgcttcctgagtttcacatggagcttttcacagcgctg
gcaaaggtgtgtcaggtaaacctctttttattgaacccctgcccccagtattggggggat
attctttctgatgcagaaaagcggcgcctcaagcgtaaaaagggcattgaaggggaaggg
gacgagaccctttatatggaagcgggcaaccccttgcttgcctccatggggggacagggg
cgggaattttttgacatgcttgcagaacgcggccttgaggagtttcccctttttgtcgag
ccggaggaggagaccctgcttggctccgtccaggctgatatctttcacctgagggaccga
acccggggagaggtcgaaccctttgtcttgaatgagtcggaccgctcctttaccgttcac
agctgtcacagcccgttgcgggaggtggaggtgctgcgggacgccattttggcgatgatg
gatgaggattcggacttgaggccctcggatattcttgtcatggccccggatatcaacacc
tacgcaccggtcatcgaggcggtgttcaacaggcgcgtggaaggggaggtcaggattccc
ttctccattgccgaccaggcgaacaaaagtggcgacagcgccgtagaggcgattttgctt
ctcctcgatttgtcgggtttccgttttgaggcagccggtgttctggaattgctggaaaac
gatcgcattcgcagcgcctttggaatggccgaaggggacctcgagcgggtgacccagtgg
attcgggagacggccatccgctgggggatagacggagaacagcgcggctccgaagggttt
gcctgctttgaagagaacagctggaaagtagggtttgaaaggctttttaccggctatgcc
gtgggggacgatgagctggccctttttgacggcacattgcccgcagggccggtggaaggg
gaccaggcggtgctccttgggcgcctggttcactttatggagcgcctgacgaggtatgtg
aaggggctggaacagcccaggagcgccggggcgtgggtcagctttttcgaagacgttctt
gagacgtttcttatggatgaagacggggccggggaagggcttcagggcatccgcgatacc
ctgtaccgtatggccgacgccgcccgtgaggcggaaaacgaagagcccgtggattattcg
gttgtgcgctttatcatgaaaaccgccctgggtgctccggatccggcatcggggttcatt
acaagcgggattaccttctgcgccatgctgcccatgcggagcatcccttttcgggtgatc
tgtatcttgggcatggggcacggcacgtttccccggcagcaccgggcacccgggtttgac
ctgattgcagccaacccaaggcggggggaccgctcccggcgcaaggacgatcgctatctg
tttcaggagattcttctgtccgtaagggaaacactctggatcagctacacaggccagagc
atacgggacaacagcaccctccagccgtctgtgcttctttcagaactcctggattacgtg
gatggggcggtggaaggcggtgcctcgggccaaatcgtggtgaaccaccccttgcacccc
ttttccggcgactacttccagaaagaggggtcccgtcttttcagttacgatgcggcgagc
cgtcgtgtggccgtccgcatggccgaatcaccgctctctcctgcgccctttgcgtctctt
gccgacctggacagagagcaccccatgccggtccagctcccattggaaaccctggaggcc
tccctggcacatcccagccggtatctccttcgtgatgtcctgggcatggaactcggggga
gggggggaagccccggacagctgtgagccatttacattgcaggggctggagcgacaccgg
gccggatccctgctctttgaagcgattttgtggggcgaatcacctgaaaaggcccttgag
gttgtctcgggcatgggccttttgccgaggggggaggtgggcgctcatatgttgagggac
atcacccgggaagcccgtgccgtggcagaggctcttggccccttgacccaggatattgag
ccgttgttcgagcggcagtgggtggagatttcaggggttggtctctccggggaggtgggg
cctctgtttggcgacgtcctcgtggtggggcgcttcggcaaagtgagggggcaggacctt
gtgtccgcctggttgcgccttctccttgccgccaccgccggcatgccggtaagccgcgcc
gttgttgtggggctggatcgaaaaaccggaggggcggaggttgttcccatggcggtgcca
cccaaccccgcagcggtgctggagtccctggtccggctctccgttgcaggcggtgaaggg
ctcctgcccctgtttcccatggcgtccgaggcctacgcacaggagatgatgaagtcccgt
gatgaggcaaaggcgatgtccaaggccaaaaacgctttttacggaaacgcctttgccacc
atggccgatctcaatgacccctggataaaaatggccgttcggggactggaccccctttca
tccgaagggttttcgcgatgcgccgagacgctctataaaccgattctggaggcccgtaca
gcatga
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