Desulfoluna limicola: DSLASN_19640
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Entry
DSLASN_19640 CDS
T07859
Symbol
frdB
Name
(GenBank) succinate dehydrogenase
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
dek
Desulfoluna limicola
Pathway
dek00020
Citrate cycle (TCA cycle)
dek00190
Oxidative phosphorylation
dek00650
Butanoate metabolism
dek00720
Other carbon fixation pathways
dek01100
Metabolic pathways
dek01110
Biosynthesis of secondary metabolites
dek01120
Microbial metabolism in diverse environments
dek01200
Carbon metabolism
Module
dek_M00009
Citrate cycle (TCA cycle, Krebs cycle)
dek_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DSLASN_19640 (frdB)
00650 Butanoate metabolism
DSLASN_19640 (frdB)
09102 Energy metabolism
00190 Oxidative phosphorylation
DSLASN_19640 (frdB)
00720 Other carbon fixation pathways
DSLASN_19640 (frdB)
Enzymes [BR:
dek01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
DSLASN_19640 (frdB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_7
Fer4_8
Fer4_9
Fer4_10
Fer4
Fer4_17
Fer4_18
Fer4_2
Fer4_21
Fer4_6
Fer4_4
Fer2
Fer4_3
Fer4_15
Fer4_22
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
BCS96332
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All DBs
Position
complement(2439116..2439868)
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AA seq
250 aa
AA seq
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MTQTIGLTLKIWRQDGPDVRGTLETHDVRDISTDASFLEMLDILNERLVLNGQDPVAFDH
DCREGICGTCGAVVNGKAHGPLKETTLCQLHMRHFEDGDVVVIEPWRSRAFTVIKDLVVD
RSTLDAIIQAGGYISVNTGGTPDANAVAVSQEQAENAMDAAECIGCGACVAACPNGSAML
FTSAKVSHLAQLPQGKPEAKKRVESMVACMSELGFGNCGNERECEAACPKGISIAHISRM
NREFLKSFFR
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaaccatcggtttgaccttgaagatctggagacaggatgggcctgacgtaagg
ggcacccttgaaacccatgacgtgcgggatatttcaacggacgcctcgtttctggagatg
cttgatattctgaatgagcggctcgtgctcaacggccaggatcccgtggcctttgatcac
gactgccgggaagggatctgcggcacctgcggggctgtggtcaacgggaaggcccacggc
cccctgaaggagaccaccctgtgccagctccacatgcgccattttgaagacggcgacgtg
gtggtcatcgagccatggaggtcacgagcgtttactgtcatcaaggacctggtggtggac
cgcagcaccctcgatgccatcatccaggcggggggctatatttcggtcaataccggtggc
accccggatgccaacgccgtggcagtctctcaggagcaggcggaaaacgccatggacgct
gccgagtgcattggatgcggggcctgtgtggcggcctgccccaacggatcggccatgctt
tttaccagcgccaaggtctctcacctcgctcagctcccccagggaaagcccgaggcaaaa
aaacgggtggagtccatggtggcctgtatgtcggaactgggattcggcaactgtggcaat
gaaagggagtgcgaggcggcatgtcccaaaggcatttctattgctcatatttcgcgcatg
aaccgtgaatttttgaaatccttcttcaggtaa
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