Desulfoluna limicola: DSLASN_20370
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Entry
DSLASN_20370 CDS
T07859
Name
(GenBank) RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
dek
Desulfoluna limicola
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dek03021
]
DSLASN_20370
Transcription machinery [BR:
dek03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DSLASN_20370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
UPF0122
Motif
Other DBs
NCBI-ProteinID:
BCS96405
LinkDB
All DBs
Position
2542501..2543478
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AA seq
325 aa
AA seq
DB search
MTSDTDVTVEAPKKKAPKKKPAAKKKSNLPVPKASSGNAVTKFDPLQSYLSEISKYRLLT
RDEEIELGIRIQEQEDPDAAYELVTANLRLVVKIALDFQRVWMQNLLDLIQEGNIGLMQA
VRKFDPYKNVKFSYYASFWIKAYILKFIMDNWRLVKIGTTQGQRKLFFKLKKEKQKLIEQ
GFDPKPKLLADRLGVSQKEIIDMDQRLDGWDVSLDAPLKEDSDTERIEFLNSESDSAEDQ
VARKELESLLHNKVETFKKDLSERELEIFNSRIFSEDPLTLQEIGEKYSISRERVRQIEK
NITRRMKDFFQNQLPDFHLYTDQSD
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgacctctgataccgacgtcaccgttgaggctccaaaaaagaaggctccaaagaagaaa
ccggcagccaaaaaaaaatccaatcttcctgttcccaaggcgtccagcggcaacgctgtc
acgaaattcgacccgcttcagagctacctgtccgagatcagcaaataccggctgctcacc
cgtgatgaggagattgagctgggcataaggatccaggaacaggaagacccggatgccgca
tacgagctggtcacagcaaacctgcgcctggttgttaaaattgcactggattttcagcgc
gtctggatgcagaaccttctcgaccttatacaggagggcaacatcggcctcatgcaggcc
gtgaggaagttcgacccctacaagaacgtaaaattctcctactatgcctctttctggatc
aaagcatacatcctgaagttcatcatggacaactggcgcctggtaaaaatcggcacgacc
caggggcaacgaaaactcttctttaagttgaagaaagagaaacagaagctcatcgaacag
ggatttgatcccaaacccaagcttctcgccgatcggctcggcgtctcccagaaggagatc
atcgacatggaccagcgtctcgacggctgggatgtctcgctggatgcgcccctgaaggaa
gattccgacaccgagcggattgagtttctcaattccgaatccgactcggcggaagaccaa
gtagcacggaaggagttggaatcgcttctccacaataaggtggagacattcaaaaaggat
ctttccgaaagggaactggagatcttcaactcccgtatcttctcagaagaccccctcacc
ctccaggagatcggtgaaaaatacagcatatcccgggaacgcgtccgtcaaattgaaaaa
aacatcacccgacgcatgaaggatttctttcaaaaccaacttcccgacttccacctgtac
accgatcaatccgactaa
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